Gene Rmet_5977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5977 
SymbolczcS 
ID4036512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp83328 
End bp84758 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content60% 
IMG OID 
Productsensor histidine kinase 
Protein accessionYP_581786 
Protein GI94152379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000115745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0809179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCCG GGACTTCGAT AACCCCGCTG TCACTGACGA GGCGGCTTGG GCTCTTCTTT 
GCATTGGTAC TGTCTATCGC GCTGGCCAGC ATGGGCGCCT TTGCTTACTA CTCGCTCGCC
GCGCAACTCG AGGCCAGAGA CGATGAGGTT GTAAAGGGAA AACTCGAACA GGTCGAGCAT
TTCTTGCGCG AGGTGGACGG GGTGCAGGGC GTCCCGGCGG CGCAGCATCG CTTCGATGAT
CTGGTGCGAG GTTACTCGGA CCTCATCGTT CGCGTCACGG CGCTGGATGG CCGGCTTTTG
TTTCGCACGG GCAACGATGC ATTGCTGGAA GGCACTGACC AAGCGGCGGT CACGGGAAAG
TCATCGCTCA TGTTCCAGTC CGCCGATGCG GTGTTGGGGC GAGACGGTAC GCGGGCGACG
GTGTTCGTGG CGAAGTCTGG CGAGGACAGG AAGCAGGTGA CTGCGCGATT CCGGACGACG
CTCGTGCTTG GTACCACCGT CGGTGTGATA TTGACGGCCC TGGTGGGGGC GGCCATTACG
CGCCGTGAGC TGGAGCCGGC GCACGTACTT ATCAAGCAGA TCAACCGGAT CAGTGTGGAA
CGGCTGAGCT ACCGGGTGGA CATGCCACCC AAGCCCACCG AAGTGCGTGA TATCGCCTCT
GCGTTCAATG CGATGCTGCA ACGCCTCGAG GATGGTTATC AGAAGCTGTC GCGGTTCTCC
GCCGATCTTG CCCATGATTT GCGCACGCCG CTTAACAACC TCATTGGACA TGCCGAGGTC
GCCTTGTCAC GAGACCGCAC CGGGCCCGAG TATGTCGCCT TGGTGGAGGA AAGCCTGGTC
GAATACCAGC GACTTGCGAG GATGATCGAT GCGATGTTGT TCCTCGCGCG AGCTGACAGT
GCCAATGTGG CGCTCGAGTT GACGGAACTC CAGTTGAATG CAGAACTTCG CAAGTTGTCC
GCCTACTTTT CGGTGCTTGC AGAGGAGCGA AGCGTCGTAA TCAGGGTAAG CGGGGATGCC
ACCCTGGTCG CTGATGCCAT TCTGTTCCAG CGTGCGATCA ACAATGTTCT GTCAAATGCG
GTCCGTCATG CGTGGCCGAA TTCGATGATA GATCTGGTGG TGCGCCGCGA AGCGGCACAT
TGTTGCATCG ACATCACGAA CGTTGGAGAC CCAATCCCGG AGCGGGAACT TTCCCTCATC
TTTGATCGGT TCTTCCGTGG GGATAGGGCG AGATCCAACT CGTCACAGTC CACGGGGCTG
GGCCTGGCCA TCGTCCTGTC GATCATGGAG CTCCATGGCG GCGACGCGTC AGCCGTGAGC
GGCTTGGATG GGAAGACACG CTTTACATTG CGCTTCCCGC TCAACGGTGC TGAAGCCTCA
GCGCGGGTTT CGGTGGGTAG GCCGAGTCAG GACCGACCAG TCGTTGGGTA G
 
Protein sequence
MRPGTSITPL SLTRRLGLFF ALVLSIALAS MGAFAYYSLA AQLEARDDEV VKGKLEQVEH 
FLREVDGVQG VPAAQHRFDD LVRGYSDLIV RVTALDGRLL FRTGNDALLE GTDQAAVTGK
SSLMFQSADA VLGRDGTRAT VFVAKSGEDR KQVTARFRTT LVLGTTVGVI LTALVGAAIT
RRELEPAHVL IKQINRISVE RLSYRVDMPP KPTEVRDIAS AFNAMLQRLE DGYQKLSRFS
ADLAHDLRTP LNNLIGHAEV ALSRDRTGPE YVALVEESLV EYQRLARMID AMLFLARADS
ANVALELTEL QLNAELRKLS AYFSVLAEER SVVIRVSGDA TLVADAILFQ RAINNVLSNA
VRHAWPNSMI DLVVRREAAH CCIDITNVGD PIPERELSLI FDRFFRGDRA RSNSSQSTGL
GLAIVLSIME LHGGDASAVS GLDGKTRFTL RFPLNGAEAS ARVSVGRPSQ DRPVVG