| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5974 |
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| Symbol | ompP |
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| ID | 4036509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 86028 |
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| End bp | 87095 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | porin OmpC |
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| Protein accession | YP_581783 |
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| Protein GI | 94152376 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0182107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0474626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA GTCGCATTGC CGTCGCATCC CTCGGTCTGT TCGCTACAAC CGCATTCGCT
CAATCGAGCG TCACGCTGTA TGGTGTGGCC GACGCGGGTA TCGAGTATCT GAGCAACGTC
CCATCGGCTT CGCCCGGTGG CTCGAACCAG GTTCGCATGA CCTCCGGCAA CATGTCGACG
TCGCGTTGGG GCCTGCGTGG CGTCGAAGAC CTTGGCGGCG GTCTGAAAGC CATCTTCGAA
TTGGAAAGCG GCATTTCGTT CGACACCGGC GCACAGAACA ACAGCACCCG TCTTTTTGAT
CGTAGTGCCT TCGTAGGATT GGGTAGCAAA TATGGTCAAC TGACGTTGGG TCGTCAAACG
ACACCAATGT ATGACACCAC GCTGCAACTC GACCCGATGG GCTTCGCGCC GCGCTACTCG
CTCTTCAAGA TGGATGACGT CTTGGCGGGT CGCGCTGACA ATGCTATCAA GTACCGTGGC
ATCTTCAGTG GCCTGACGGT CACCGGCCTC TACAGCTTTA GCCGCACCGG CGGCGGCGAA
GTGCCGGGGA ACTACAAGGT CGATCGAAAC ATGGGCGTAT CGCTCATGTA TGAAACCGGC
GCCCTCGCTG TCGGCGCGGT GTACGACGAG ATCCAGGGCA GCACCGTCGC CACGGCCGAC
CGCAAGGACC GCCGCGCTCT AATTGGCGCG AGCTACGCTT TCGGACCGGC TAAGGCATTT
ATTGGTTATC GCTGGTACAA CGGCAATGTC GGTGCGCTGC CGACGAACGG TTCTAACATT
TACTGGGCCG GCCTGCGCTA TGGCCTGACG CCCGCACTGA CGCTGACCGG CGCCGCCTAC
TACACGGACA GCCGCAATTC TGGCGCAGAC CCGTTCCTGT TCGTTGCCTC GGCAGATTAC
GCTTTCTCGA AGCGTACCGA TGTGTATATG AACGTCGGTT ATGCACTGAA CCGCGGCAAC
TCGCAGCTGG GCATGAACGG CTACAACTCG ACGACCGGCA GCCCGACCAA CGTTGTCCCT
GGCAAGGATC AGACCGGCGT CGTCGTAGGC GTACGCCACA AGTTCTGA
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| Protein sequence | MKISRIAVAS LGLFATTAFA QSSVTLYGVA DAGIEYLSNV PSASPGGSNQ VRMTSGNMST
SRWGLRGVED LGGGLKAIFE LESGISFDTG AQNNSTRLFD RSAFVGLGSK YGQLTLGRQT
TPMYDTTLQL DPMGFAPRYS LFKMDDVLAG RADNAIKYRG IFSGLTVTGL YSFSRTGGGE
VPGNYKVDRN MGVSLMYETG ALAVGAVYDE IQGSTVATAD RKDRRALIGA SYAFGPAKAF
IGYRWYNGNV GALPTNGSNI YWAGLRYGLT PALTLTGAAY YTDSRNSGAD PFLFVASADY
AFSKRTDVYM NVGYALNRGN SQLGMNGYNS TTGSPTNVVP GKDQTGVVVG VRHKF
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