Gene Rmet_5973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5973 
SymboltnpB 
ID4036508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007971 
Strand
Start bp87212 
End bp88105 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content62% 
IMG OID 
Producttransposase catalytic site ISRme3 
Protein accessionYP_581782 
Protein GI94152375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.291095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0449823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTATG CGTTCATCGA GCGAAACCGA CGTTACTGGC CGGTCTCGGT CCTGTGTGAG 
CTGTTAGGGG TCAGCCCCAG CGGCTATCAC CAGCGCAAGC AACGCACAGT AAGCACCGAC
AGGCCAGATA GAGGCCGACT CAGTGACGAT GCCTTGTTGG CCCACATCAA GGCGATTCAC
GCCGGGGTCA AGGGGGAGTA CGGCTGGCCG CGCATGTGGA AGGAACTGCT GGCGCGTGGG
GTGCGGGTGG GCAAGGAGCG TGTTCGCAAG CTGATGGCGC TGCACGGCAT CCGTGCCCGC
CACAAGCGCA AGTACATCGC GACAACCAAC TCGAACCACG ATTTGCCGGT GGCCCCCAAT
CTGCTGCAAC GCGACTTTAG CCCAGCAGCA CCCAATCAAG TCTGGACGAG CGACATAACC
TATGTGGCGA CCGCCGAAGG CTGGCTCTAC CTGGTGGTCA TCATCGACCT GTTCAGCCGG
CAGGTGGTTG GCTGGTCGAT GCAACCACAC ATGAAGGCCG AATTGGTCAC GGACGCGCTG
CGCATGGCCT GGTTCCGGCG CCGCCCGGAA GCCGGTGTGA TTGTGCACAC CGACCGGGGA
AGCCAGTATT GCAGCCATCT GTTTCAAGAC GCCCTGAAGG CGTATGGCAT GCGCTCGTCA
ATGAGCCGCA GGGGCGATTG CTGGGACAAC GCGCCGACTG AGAGTCTGTG GGGGTCGTTG
AAGGTCGCTC GCCTGCACGG TCGCCAGTTC GCTACCCGCC GCGCCGCAAT GGACGAGGTA
ATTGACTGGC TTGGCTTTTA TAATGCCAGC CGACTCCACT CGACGCTGGG CTACGTCAGC
CCCATGACGT TCGAGAAAAA CTGGTCCGCA GCTCAGCAAC ACCGGGCTGC CTAA
 
Protein sequence
MRYAFIERNR RYWPVSVLCE LLGVSPSGYH QRKQRTVSTD RPDRGRLSDD ALLAHIKAIH 
AGVKGEYGWP RMWKELLARG VRVGKERVRK LMALHGIRAR HKRKYIATTN SNHDLPVAPN
LLQRDFSPAA PNQVWTSDIT YVATAEGWLY LVVIIDLFSR QVVGWSMQPH MKAELVTDAL
RMAWFRRRPE AGVIVHTDRG SQYCSHLFQD ALKAYGMRSS MSRRGDCWDN APTESLWGSL
KVARLHGRQF ATRRAAMDEV IDWLGFYNAS RLHSTLGYVS PMTFEKNWSA AQQHRAA