| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5954 |
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| Symbol | tnpA |
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| ID | 4036411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 104785 |
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| End bp | 105795 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | transposase ISRme10 |
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| Protein accession | YP_581763 |
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| Protein GI | 94152356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0246651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAAA GCTACAGTCA ACTGGGTATC GAAGAGCGTA ACTGTAGTCA TCGCCTGCTA
AACGAGGGGT GCAGCCTGCG TCAGGTCGCG AGAGTGGCGG GGCGAAGTCC GTCGACTATT
TCACGCGAGG TTGCCCGGGC CGGAGGTCAT CGTTCCTACG ATGCTGCGAG CGCGCAGGGT
ATGGCGCTGA GAAGGCGTCG ACGTGGGCCG CGCAAGCTGG CAGCAGGCAC GGCGCTGCTG
AAGCTGGTGA GAGCATGGCT GCGCGTGGGC TATTCACCGC AACAGATTGC AGGCAGACTC
CGGCGCATGT ATGCCCACCA GCCGGAGTTC CATGTGTCCC ACGAGACGAT CTACTGCGTG
ATCTACGCCA CGCCGCGCGG TGAGCTGCGC CGCGAGCTAA TCGGCAGCCT GCGTAAGGCC
CACAAGGAGC GTCGTTCACG GGGCGCGGGG AACGATCGCC GAGGCAAGCT GCAGGATATG
CGCTCGATCC ACGAGCGGCC CGAGGAGGTG TTCGAGCGGC TGGTGCCTGG GCATTGGGAA
GGCGACCTGA TCAAGGGCGC GGGCAATCGC AGCGCAGTGG CGACGCTGGT GGAACGCAAG
ACGCGCTTCG TGGTGTTGGC GAAGATGGAC GGTTGCGGGG CGGAGGCAGC GCTGGAGGCG
TTGACCAAGA AGTTCCGTCG GGTGCCGCTG GCGCTTCGCA AGAGCCTGAC CTACGACCAG
GGCAAAGAGA TGGCGCATCA CGCAGAGCTG ACCAGGCGAG TCAGTACCGA AGTGTTCTTT
GCCGACCCGC ACAGTCCGTG GCAGAGGCCA AGCAACGAGA ACATGAACGG ACTGGTTCGG
GAGTATCTAC CGAAAGGCGA CGATCTATCG GTCTTCTCGC AGGGGTACTT GAACGGAGTC
CCGAAGGCGC TGAATTATCG CCCTCGGGCG GTTCTCGACT TCGCCACTCC CGCCGAAGCC
ATGGCCGAAG AGATCAACAA ATTACGAACT GGTGTTGCAT CTCAGACTTG A
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| Protein sequence | MGQSYSQLGI EERNCSHRLL NEGCSLRQVA RVAGRSPSTI SREVARAGGH RSYDAASAQG
MALRRRRRGP RKLAAGTALL KLVRAWLRVG YSPQQIAGRL RRMYAHQPEF HVSHETIYCV
IYATPRGELR RELIGSLRKA HKERRSRGAG NDRRGKLQDM RSIHERPEEV FERLVPGHWE
GDLIKGAGNR SAVATLVERK TRFVVLAKMD GCGAEAALEA LTKKFRRVPL ALRKSLTYDQ
GKEMAHHAEL TRRVSTEVFF ADPHSPWQRP SNENMNGLVR EYLPKGDDLS VFSQGYLNGV
PKALNYRPRA VLDFATPAEA MAEEINKLRT GVASQT
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