Gene Pcryo_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2466 
Symbol 
ID4035568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp3047079 
End bp3048653 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content44% 
IMG OID637974959 
ProductFmu (Sun) 
Protein accessionYP_581727 
Protein GI93007290 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.483409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.190397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAA CCAGCACTGC ACCAAGAAAT AACAAGCTCA AACCGTCAAG CAACCTTATC 
ATGAATGGTA GCGTTCGCGT TCGCGTGATT CGCACTTTGC TGGCCATTCA AAATGGTCAG
TCGCTAGCAA GCGTCCTTGA TCCGTTACTA AATAGTCTTC ATGATGGGGA TAAAGGTTTT
GCTCATGCGT TATTGCTAAC GACGTTGCGC CAGTGGTATG CCCTTGAGCG TCTACTCGAT
AGTCTGGCTG ATAACTCGAT TGATGAAAAA GAAGTACGTA CGACGATTCA AGTAGGTTTG
ACGCAGCTGC TCTATTTGCA AGTGGCTGAC CATGCGGCAA TTCATGAAAC GGTTGAAGCA
GCAAAAGAAA TTGAGTTTGC GCATGCGACG GGTTTAATCA ATGCCATCTT GCGTAAAGTT
GCTAAGAACC CAAGTAAGTT CCGTAAGAAG TGTGATAAAA AACACAGCTT ACCGAATTGG
CTTGCCTATC AGCTTAAGCA AGATTGGAGT GAGCAGTATG ACGATTTGAT GCAGGGTCTA
CGTCAACCTG CGCCAATGTT TTTGCGAGTA AATACAGCGG TTACTTCGAT AGAGGACTAT
CAGCAAGCAT TAGTGGAATT TGAAGTTGAA GCGGACTTAG TTGAGCTAAC AAGTGGCTTA
CAACTCGAAA ACTCGTCGGA TACAGCCACT TCTAATAGTA TAGTAACCAA AGGTCTTAGA
CTACATCAAA GCACTGCAGT CAATGCCTTA CCACAATTTG CCCACGGGGC GGCTAGTGTG
CAAGATATGC ATGCTCAGCT TGCAGCACCG CTTATCCATA GCGCTCTACT CAATAAGCTG
AGTGTTAAAA ACGATGATGC AGACGGCGAT ATGGATACGA GCAACAATGA GATTCGTATT
TTAGATGCCT GTGCAGCGCC GGGTGGTAAG CTTGCTCATT GGTTAGAATT AATTAGTTCA
GACGAGCAAT CACCTTTGTT TCACGTGAAA CAAAACGAAG AATTTGTTTC TCTAGTTTCG
AAAGTGAAGC TAACTGCGAT AGATAATGAA GCGCCGCGTA TCGAGCGTAT TTATGATAAT
TTACAGCGCT TGAATTTAAG TCAGCATGAT TTACAGCAAG CTGAGAAAAA TATTGAGCTC
AATATTGTTT GTGCTGATGC GACCACATGG CAAGGGGCTG GTAAGAAAAA GAGCAAGCTC
GTATTTGACG CTATATTGCT AGACTCACCT TGTACGGCGA CTGGCGTGAT TCGTCGCCAT
CCTGATATCA GTATCTTGCG TACTGAAGAA GACGTCGAAC AAACCGCACT TTTGCAAGCC
GATATCTTGC ATAATCTATG GCCACAACTT AAGGTTGGCG GTTATTTGTT ATATGTTACT
TGCTCTATCC TAAAGCAAGA GAACGTCGAG CAGATGCAGG ATTTCATGAC TCATTATAAT
AATGTAGCAG CTGTTGAATT TAGCGACGGT TGCAACTGGG GTATCGAACA AGCGATTGGT
CGCCAGTGTT TGCCAATTGA TAGCAAGAGC GGTGATGGTT TTTATTATGC CTTGCTGCAG
AAAACTGCTG AATAA
 
Protein sequence
MRQTSTAPRN NKLKPSSNLI MNGSVRVRVI RTLLAIQNGQ SLASVLDPLL NSLHDGDKGF 
AHALLLTTLR QWYALERLLD SLADNSIDEK EVRTTIQVGL TQLLYLQVAD HAAIHETVEA
AKEIEFAHAT GLINAILRKV AKNPSKFRKK CDKKHSLPNW LAYQLKQDWS EQYDDLMQGL
RQPAPMFLRV NTAVTSIEDY QQALVEFEVE ADLVELTSGL QLENSSDTAT SNSIVTKGLR
LHQSTAVNAL PQFAHGAASV QDMHAQLAAP LIHSALLNKL SVKNDDADGD MDTSNNEIRI
LDACAAPGGK LAHWLELISS DEQSPLFHVK QNEEFVSLVS KVKLTAIDNE APRIERIYDN
LQRLNLSQHD LQQAEKNIEL NIVCADATTW QGAGKKKSKL VFDAILLDSP CTATGVIRRH
PDISILRTEE DVEQTALLQA DILHNLWPQL KVGGYLLYVT CSILKQENVE QMQDFMTHYN
NVAAVEFSDG CNWGIEQAIG RQCLPIDSKS GDGFYYALLQ KTAE