Gene Pcryo_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2446 
Symbol 
ID4035236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp3020236 
End bp3020913 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content44% 
IMG OID637974939 
Productphosphoglycolate phosphatase 
Protein accessionYP_581707 
Protein GI93007270 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC AACTTTTAAT TTTTGATTTT GATGGTACCC TTATTGATAG CGTGCCAGAT 
TTGGCGGATG CGACCAATGC GATGCTGACT ACCCTTGGCA AAACGCCCTA TCCTCTCAAT
AGCATTCGTA ACTGGGTCGG TAATGGCTCA AGAATGCTTG TTGAGCGCGC CTTGGTTGGT
AAGATAGAGG TTTTAGAGGG TGAATTAGCC AAAGAAGCCG TCGACCATGC TGAGCAAGTA
TTTTTCGATG CTTATAAAAA TATCAGTGGC AGCAAAACTG TCGCTTACCC CGATGTTGAT
AGTGGGCTCA GAAAGCTACA AGCAGCAGGA TATGAGCTGG CATTGGTCAC CAATAAGCCG
ATTCGTTTTG TACCAAAAAT ACTGCAAGCC TTTGGCTGGC AAGACATCTT TAGCGAAGTG
CTTGGCGGTG ATAGCTTGTC TAGCAAAAAA CCAGACCCCG CGCCGTTATT ACATGTCTGT
GAGACGTTGA ATGTTACTCC AAAACAAGCG GTCATGATTG GTGATTCAAG AAATGATATC
TTAGCGGGAC AAAATGCCAA TATGGACACG CTCGCATTGT CTTATGGTTA TAACTATGGG
CAAGATATTC GTGAGCTTAA TCCTACGGCA GCCTTCGATG ATTTTAGCGC TTTGGTGGAC
TATTTATTAA AGAGTTAG
 
Protein sequence
MDKQLLIFDF DGTLIDSVPD LADATNAMLT TLGKTPYPLN SIRNWVGNGS RMLVERALVG 
KIEVLEGELA KEAVDHAEQV FFDAYKNISG SKTVAYPDVD SGLRKLQAAG YELALVTNKP
IRFVPKILQA FGWQDIFSEV LGGDSLSSKK PDPAPLLHVC ETLNVTPKQA VMIGDSRNDI
LAGQNANMDT LALSYGYNYG QDIRELNPTA AFDDFSALVD YLLKS