| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2409 |
|---|
| Symbol | |
|---|
| ID | 4035018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2966810 |
|---|
| End bp | 2967622 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637974891 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_581670 |
|---|
| Protein GI | 93007233 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.726784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCT TTAAAGAGAA AACAGTCGTC GTAACAGGTG CCGACTCACA TATCGGTCGT
GCAACTGCCA TTCGTTTTGC GAATGAAGGT GCTAATGTCA TACTCGTCGG ACGCTCGACC
GATACATTAA ATCAAATCAC TGAAGGGTTT CCACAAGACC GTACATGGAT TCATACCGAC
AACTTTTTAA CCATTGCTTG TGACATTGGT GTTGAGAGCC AAGTACAAGA GATGATAAAA
AGAGTCATCG ATAAGTTTGA ATCAATCGAT ATATTGGTGA ATAACGCAGC ACAAACAACG
CAAGGCAGAA ATAGTGGGTT ATCTACTGAA CAGAAGAGTC CGGCTGTTGA TGACTATTTA
AGTGAAACCT TGTATGTCTG TCAGACGGCC ATGCCTTACT TAATACAGAG TAAAGGTAGT
ATCATTAACG TTCCTTCATT TGCAGCTTGT AGTAGCGATC AGAGTGCAGC GACTTATGAT
GCTGCCACCT CAGGTATTAC TGATTTGACC CGTACGTTGG CTTCGGCACA CAGCGCAGAC
GGCGTGCGCG TTAATGCAGT AAATCCAAGC GTCACTCAGT CTGATATATC AGATGCGATT
CAAAACACCG ATATTCAAAA TACTGATATA ACAGATCTTC AAGCAAATAT AGATGAATCA
TCAGATAATA GTCCATTAGG ACGCTGTGCC ACACCAAACG ATATTGCCGC GGTGATTACT
TTCTTAGCAA GCGATGATGC TGCCATGATT ACTGGTACCA ATTTGCCCGT CGATGGCGGT
GTAAGCACTT CTAACCGTCA GTTACCTTTA TAA
|
|---|
| Protein sequence | MKRFKEKTVV VTGADSHIGR ATAIRFANEG ANVILVGRST DTLNQITEGF PQDRTWIHTD
NFLTIACDIG VESQVQEMIK RVIDKFESID ILVNNAAQTT QGRNSGLSTE QKSPAVDDYL
SETLYVCQTA MPYLIQSKGS IINVPSFAAC SSDQSAATYD AATSGITDLT RTLASAHSAD
GVRVNAVNPS VTQSDISDAI QNTDIQNTDI TDLQANIDES SDNSPLGRCA TPNDIAAVIT
FLASDDAAMI TGTNLPVDGG VSTSNRQLPL
|
|---|
| |