Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_2321 |
Symbol | |
ID | 4035877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2849778 |
End bp | 2850311 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637974800 |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_581582 |
Protein GI | 93007145 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTG CTCCAAACGC TAGTGCCCTT ATGAAAATTG GTCAGCTCAA AAAGCCTTAT GGCATCAAAG GTTGGCTTTG GGTATTTAGT GAAACAGACG ATCGTACGGC GATATTTGAC ATCAAGCCTT GGTGGATGAA AACCGCTACC GGTATGAAAC CTTTGACAGT AAAGGCTTGG CGTGAGCAAG GCACAGGAAT TGTGGCTCAG TTTGAGCAGA TTCCTGATCG CAATGTTGCT GAGACCATGA ATGGGGTAAC TCTTTGGGTC GAGCAAGACA TCTTGCCAGA ACCTGCTGAG GATGAATACT ATTGGTCGGA TTTGGTCAGC CTGCGCGTGA TGAACGAGCA GGATGAATAT CTAGGCGATA TTACTGAGAT GTTTGAAACT GGCGCCCACG CTATTATGCG GGTTGCGGCA ACGACAGACA GCTTGGATAA AGAAGAGCGC CTAATTCCAT GGCACAAGCA AACTGTAGTG AAAGTCGATC TGACTGAAAA GACAGTGCTA GTGGCATGGC CAAGTGACTA TTAA
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Protein sequence | MSSAPNASAL MKIGQLKKPY GIKGWLWVFS ETDDRTAIFD IKPWWMKTAT GMKPLTVKAW REQGTGIVAQ FEQIPDRNVA ETMNGVTLWV EQDILPEPAE DEYYWSDLVS LRVMNEQDEY LGDITEMFET GAHAIMRVAA TTDSLDKEER LIPWHKQTVV KVDLTEKTVL VAWPSDY
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