Gene Pcryo_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2321 
Symbol 
ID4035877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2849778 
End bp2850311 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID637974800 
Product16S rRNA processing protein RimM 
Protein accessionYP_581582 
Protein GI93007145 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTG CTCCAAACGC TAGTGCCCTT ATGAAAATTG GTCAGCTCAA AAAGCCTTAT 
GGCATCAAAG GTTGGCTTTG GGTATTTAGT GAAACAGACG ATCGTACGGC GATATTTGAC
ATCAAGCCTT GGTGGATGAA AACCGCTACC GGTATGAAAC CTTTGACAGT AAAGGCTTGG
CGTGAGCAAG GCACAGGAAT TGTGGCTCAG TTTGAGCAGA TTCCTGATCG CAATGTTGCT
GAGACCATGA ATGGGGTAAC TCTTTGGGTC GAGCAAGACA TCTTGCCAGA ACCTGCTGAG
GATGAATACT ATTGGTCGGA TTTGGTCAGC CTGCGCGTGA TGAACGAGCA GGATGAATAT
CTAGGCGATA TTACTGAGAT GTTTGAAACT GGCGCCCACG CTATTATGCG GGTTGCGGCA
ACGACAGACA GCTTGGATAA AGAAGAGCGC CTAATTCCAT GGCACAAGCA AACTGTAGTG
AAAGTCGATC TGACTGAAAA GACAGTGCTA GTGGCATGGC CAAGTGACTA TTAA
 
Protein sequence
MSSAPNASAL MKIGQLKKPY GIKGWLWVFS ETDDRTAIFD IKPWWMKTAT GMKPLTVKAW 
REQGTGIVAQ FEQIPDRNVA ETMNGVTLWV EQDILPEPAE DEYYWSDLVS LRVMNEQDEY
LGDITEMFET GAHAIMRVAA TTDSLDKEER LIPWHKQTVV KVDLTEKTVL VAWPSDY