| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2261 |
|---|
| Symbol | |
|---|
| ID | 4034996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2772617 |
|---|
| End bp | 2773675 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637974735 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_581522 |
|---|
| Protein GI | 93007085 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.282279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.056564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAG CTCCTCTTTT TTCAATAGGT GCATTAGCAG CTATTAGCCT TCTAGGTTGT
TCTAATCAAG CTTCTGATAG TACTGATGCT TCTGCAGCAA CTTCTCAAGA AACAACCACA
TTGCGCTTTT CTCATTTTTG GCCAGCAACC TCCTCTATTA GTACAGAGGT CTTTGAACCT
TGGGCTAAGC AAATAGAAGC AGATTCTAAT GGTCGTTTAA AAGTAGAGTT ATATCCTTCA
GCTGGTCTTG CTAAAGCAGA CGTTACTTAT GAATCTGCTG CCAAAGGCAC GATAGATATT
GGCTCACAAG CACACGGCTA TACCAATGGT CGCTTTCCTT TAACTCAGAT TACTGAGCTT
CCTGGTTTAT CAAACTCAGC GACTCAGATG GGTTGTATGC TCCAAACTCT ATATGAAGAT
GGTACTTTAG CTGGTGAATA TGAAGATACG CATATGTTGT TTATGTATGG TGCTGGACCG
GGTGCGTTGC ATACAACGAA CAAATTAATT CGTACACCTG AAGATATGAA AGGTATGCGT
ATTCGTCGTC CTTCTGCGGT TGCTGGCGAC ATCATCGAAA GTGCGGGAGC CTCACCAGTA
GGCTTGCCTG CCAATGACAT GTATACGTCT TTGCAACGCG GCGTCGTTGA TGGTTTGAGT
TTTCCATGGG AAGCTGTGAC CGCCTTTAAA ATTGACGAAA TTACCAAATA CCATACCAAT
ATTCCTTTTT ATAGTTCAGC GCTTATGGTG ACTATGAATA AAGATAAATA TGAGAGTTTA
CCGGATGATT TGAAAAAGGT ACTGGATAAA AATTCAGGTA TGGCGCTTGC CAATAAGGTT
GGTGAAGTAT TTGATAAACA TGATGATATG GCAATAGAAG CAGCTAGGAA AAAAGGTGAT
GAAATCGTTG AAATCCCTGA TCCATTAAAT GATCCTAACT GGAAAGGACC GCTTGAGAAA
GGCACCAATA AATATCTTGC TGATGTTAAA GCGCTAGGTC TAGATGCAGA GGGCGTTTAT
GCTAAAGCAA AAGCCGCCAG TGCAGCCTGT AAGGTCTAA
|
|---|
| Protein sequence | MKLAPLFSIG ALAAISLLGC SNQASDSTDA SAATSQETTT LRFSHFWPAT SSISTEVFEP
WAKQIEADSN GRLKVELYPS AGLAKADVTY ESAAKGTIDI GSQAHGYTNG RFPLTQITEL
PGLSNSATQM GCMLQTLYED GTLAGEYEDT HMLFMYGAGP GALHTTNKLI RTPEDMKGMR
IRRPSAVAGD IIESAGASPV GLPANDMYTS LQRGVVDGLS FPWEAVTAFK IDEITKYHTN
IPFYSSALMV TMNKDKYESL PDDLKKVLDK NSGMALANKV GEVFDKHDDM AIEAARKKGD
EIVEIPDPLN DPNWKGPLEK GTNKYLADVK ALGLDAEGVY AKAKAASAAC KV
|
|---|
| |