| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2246 |
|---|
| Symbol | |
|---|
| ID | 4035544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2755114 |
|---|
| End bp | 2756586 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637974720 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_581507 |
|---|
| Protein GI | 93007070 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.27518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGA ATCACTTATC CACCTTATCT TTATTGACGG CAGCGATTGG CTTAAGTCTT
GCCAGCACCG CTCAAGCTGC CAAGCCAGAC GCCCCAAACT TGTCTAATGC TCAGTTTCAG
CAGTGTCTAG ATGGTCTAAA AAACTCTAGC AAATTTCGTG ATGTTGATAG CTATACCTTT
AATAACTATC GTCCCAGTGA GCCTGACCCT AGTGTTATTC AATCGCTAAA CTATCAACCT
GAATTTCAAA AAGACGTTTG GGATTATTTG TCATCACTTG TTGATACCGA ACGCGTAGAA
GATGGTATCC GTGCCAAGCG TCAATGGGCG GATACGTTAC GTAAAATTGA ATCGCGCTAT
GGCGTTAAAG CCGAGCACGT ATTAGGCGTT TGGGGCGTAG AGTCTAACTT TGGGCAGACA
TTGGGCAAAA AACCTTTGTT TGAATCTTTA GCGACCCTAT CTTGCTTTGA TCGCCGCCAA
AGCTATTTCC AAGGCGAATA TGCCAATGCA CTAAAAATCG TCCAAAACGG TGATATTGCG
CCAAGCGATA TGACAGGTTC ATGGGCAGGC GCGTTTGGTC AGACGCAGTT TATGCCAAGT
ACATTTTTAG AGTTGGCAGT CGACTTCGAT GGCGATGGTC GCCGCGACTT GGTCAATAGC
GTCCCCGATG CCCTTGCCTC TACGGCAAAC TTCTTAGATA AACGTGGCTA CCGTTCAGGC
GAAGCATGGG GTTATGAGGT AAAACTGCCA AGTGGATTTT GGGCAGCGTC CAACCGTAAA
GATAAAAAAT CGATGAGCCA CTGGCGCAAT CAAGGTTTAA CCCTTGCTAA TGGCAGCCCG
CTTCCTTCTG ACTTGAGTAG TGCTGGATTA TTATTACCAG CCGGTCCTGA CGGCCCTGCA
TTCTTAGTCG GTAAAAACTT TGATACGTTC TATTCTTATA ACGCCTCAGA AAGCTATGCA
CTGGCGATTG CCCATTTATC AGATTTGATT ACTCGCGAGA GTAGTAGTAA AACTGACTTT
ATCACAGCAT GGCCAACTGA CGATCCTGGT ATTGGTCGTC AAGAATCCAG AGCGATTCAG
CAAGCATTAT TAAATGCAGG ATATGATATC GGCGCCGTCG ATGGCATTAT CGGTGATAAT
ACTCGTACTG CTATCCAGCA GTACCAGTCT AGCCGTGGCA TTTTTCCAGC TGATGGACGT
GCAGGGCAGA AATTCTATCG TGCCATCGTT GGTAATACGG CGCCTAATAC TTCGCAATAC
GGCAATCAGT ATAACCAGCC AACAAACAGT CGTCCTTTAA ACCCCGCGTC TGCTGATCGT
ATGGGACAAT TAATTCAACA GCAAAATACT ACATCTAATA GCTACTCACA GCCTATAGCG
ATCAGCCCAT CAAAATCAAG CACAACGCGA TATCGCCGTG TAACGGGTGC TGATGGTACT
ATAAAACTGG TACGTATTGA TGAAGGCTCT TGA
|
|---|
| Protein sequence | MRLNHLSTLS LLTAAIGLSL ASTAQAAKPD APNLSNAQFQ QCLDGLKNSS KFRDVDSYTF
NNYRPSEPDP SVIQSLNYQP EFQKDVWDYL SSLVDTERVE DGIRAKRQWA DTLRKIESRY
GVKAEHVLGV WGVESNFGQT LGKKPLFESL ATLSCFDRRQ SYFQGEYANA LKIVQNGDIA
PSDMTGSWAG AFGQTQFMPS TFLELAVDFD GDGRRDLVNS VPDALASTAN FLDKRGYRSG
EAWGYEVKLP SGFWAASNRK DKKSMSHWRN QGLTLANGSP LPSDLSSAGL LLPAGPDGPA
FLVGKNFDTF YSYNASESYA LAIAHLSDLI TRESSSKTDF ITAWPTDDPG IGRQESRAIQ
QALLNAGYDI GAVDGIIGDN TRTAIQQYQS SRGIFPADGR AGQKFYRAIV GNTAPNTSQY
GNQYNQPTNS RPLNPASADR MGQLIQQQNT TSNSYSQPIA ISPSKSSTTR YRRVTGADGT
IKLVRIDEGS
|
|---|
| |