Gene Pcryo_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2228 
Symbol 
ID4033841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2734793 
End bp2735875 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content48% 
IMG OID637974702 
Productpolyprenyl synthetase 
Protein accessionYP_581489 
Protein GI93007052 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.138475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCATA AGGAATATAA TCTATCATGT TACACTAACG ATATTTTTAT TATTCACCTG 
ATAGAAGGTT GGGTTATGTC TGTTTCTTCT ACGTCGAGCG TTGTTCCTAT TAGCTTTATC
CCTTTTAATA GCACAGAGCA GTTTCACCAT GAGGTGCGCG CGCAATTAGC CAAAGATATC
GAAGTGTTAT TTGATTACGC TGAGCTGCCA AGCCCGCTGC TTGACGCTTG CCGCTATGTA
ATGACAGGTA CAGGGAAATT GGTACGTCCA CTACTGGTTG CCAGCGCTTT TTCCAGCACT
TATAGCCATA ATGACACAAT CGCCGATAAA GACAATGCCT TGGCATCTTT GTTAGAAAAC
GACTCAGATT ATGATATGTG CCGCCGTGCA GCGTTGGCGG TGGAGCTGCT GCATACTTAT
TCGCTGGTGC ATGATGACTT GCCATGTATG GACGATGACG AGCTGCGCCG TGGTCAACCA
ACCGCTCATA TCGTCTTTGA AGAATCGACC GCCCTGCTCG CAGGTGACGT ATTACAGACG
CTAGCCTTTG AAGTATTGAC GGCGGATCTG CCAACCTTTG CGCCTTTTGA TTCCGCTATC
GCAAGTCAGT TATTTGCTAT CTTTGCCCCG CGTGCACGGC GCATGGTATC GGGTCAAATG
CTTGATCTCA ATGCTGAAGC CACTACTGGG ATTTCGCAAA ACGATTTAGA AGCCATTCAC
CGTGATAAAA CCGGCGCATT AATTGAAGCG GCGATGTTGA TGGGCGGTAT CTGTGCTGGC
GCGACGGCTC CGCAGCGCAT GGCTCTACAA GAGTGTGCAC AGCATATCGG TCTCGCCTTT
CAGGTTCAGG ACGATATTCT AGACGTAACG ACCTCTACTG ATACGCTTGG TAAACCTGCC
GGCAGTGATG AAAAGTTAGA CAAATCTACT TATGTAAAGT TAATGGGTGT CAATAATGCG
ACCAGCTATG CGCAATCGCT ATTTGATGAC GGGCGTGCAG CCATTTCTCG TGAGCTTGAC
GACAGCTCAG ACACTGATGC GCTGATGGCA CTTATCGAAT GGCTTTGGGC ACGTAAGAAA
TAG
 
Protein sequence
MWHKEYNLSC YTNDIFIIHL IEGWVMSVSS TSSVVPISFI PFNSTEQFHH EVRAQLAKDI 
EVLFDYAELP SPLLDACRYV MTGTGKLVRP LLVASAFSST YSHNDTIADK DNALASLLEN
DSDYDMCRRA ALAVELLHTY SLVHDDLPCM DDDELRRGQP TAHIVFEEST ALLAGDVLQT
LAFEVLTADL PTFAPFDSAI ASQLFAIFAP RARRMVSGQM LDLNAEATTG ISQNDLEAIH
RDKTGALIEA AMLMGGICAG ATAPQRMALQ ECAQHIGLAF QVQDDILDVT TSTDTLGKPA
GSDEKLDKST YVKLMGVNNA TSYAQSLFDD GRAAISRELD DSSDTDALMA LIEWLWARKK