| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2227 |
|---|
| Symbol | fadB |
|---|
| ID | 4033840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2731992 |
|---|
| End bp | 2734151 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637974701 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_581488 |
|---|
| Protein GI | 93007051 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.157298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATACC AAGGAAATCG CATTACGGTG ACAATGCTAG AGGATGGCAT CGCCAACATG
CAATACAACG CCGAAAATGA GAGCGTGAAC AAGTTTGACA CTGAGACCAA TAAGCAGTTT
GCTGAAGTTG TTAATGCGTT AGAAAAAGCA GATGACATTA AAGGCTTAAT CGTCACGTCA
AGCAAAGGCG TCTTTATCGC TGGGGCGGAC ATCACAGAGT TTGTGGCTTC TTTTAAGCAA
TCAGAAGAAG AAATCAAAGA TTGGGTTATT AATATCAATG ACGCCTTTAA TCGCTTTGAA
GATTTGCCTT TCCCGAAAGT AGCTGCTATC AATGGCGCAG CGCTTGGCGG TGGTTGTGAG
ATGACCTTAG TTTGCGAATA CCGCGTCATG AGCGACAAAG CTATCATCGG TTTACCAGAA
ACTCAATTGG GTATCTTCCC AGGCTTTGGT GGTACGGTTC GTAGTACGCG TGTCATTGGT
ATTGATAATG CGCTTGAACT TATTGCGACT GGCACACCAA AGAAAGCACT CGATGCACTA
AAACTAGGCT TGGTTGATGC GACTGTTGCT GCTGATGACT TGCAAGATGC TGCCATTGAT
TTGGTCAAAA AATGTATCTC AGATGAGCTT GATTGGCAAG CGAAACGAGA AGAAAAGCTC
GTTCCTGTTA AGCTAAATCA GCTTGAACAA GCGATGGCAT TTAACAGCGC AAAAGGTATG
ATCTTTGCCA AAGCCAATCC TAAGCAATAT CCTGCGCCAG CATTAGCTAT CGCTGCTATC
GAAAAACACG TTAACTTACC ACGTGACAAA GCGATTGAAG TAGAAGCGGC AGGTTTTGCA
AAAGCGGCGA AAACCCCACA AGCAGAAAGC TTGGTTGGTT TGTTCTTAAG CGACCAATTG
GTTAAAAAGT TAGCCAAACA GCACAGCAAA AAAGCACATG ACATCAACGA AGCCGCTGTA
TTGGGCGCTG GTATCATGGG CGGCGGTATC GCTTATCAAG CAGCCAGCAA AGGCTTGCCA
ATCATCATGA AAGACATCAA GTCTGAGCAA TTAGACCTTG GTATGGGTGA AGCCAGCAAA
TTACTTGGCA AAATGGTCGA TCGCGGCAAA ATAACCCCAG CAAAAATGGG CGAAACGTTA
AGCCGTATCC GTCCAACGCT AAACTATGGC GATTTTGCTG AAACTGATAT CGTCATCGAA
GCAGTTGTAG AAAATCCAAA CGTGAAGCGT GCGGTTCTTA AGGAAGTAGA AGGTCTAGTA
AAAGACGATT GTATCTTAGC GTCAAACACT TCAACGATTT CTATTACTTT CTTAGCTGAA
GCGCTTGAGC GTCCAGAAAA CTTCGTTGGT ATGCATTTTT TCAACCCAGT AAACCGTATG
CCGCTAGTAG AAGTTATTCG CGGTGAAAAA TCTTCTGAAG AAGCGATTTC AACGACCGTT
GCTTTGGCCA CAAAAATGGG CAAAGTGCCT GTCGTCGTGA ATGATTGCCC AGGTTTCTTG
GTAAACCGTG TATTGTTCCC ATACTTTGGT GCCTTTGACT TGCTACTTAA ACAAGGTGCT
GATTTTGCTC ATGTCGATAA AGTCATGGAA AAATTCGGCT GGCCGATGGG TCCTGCTTAC
CTAATCGACG TCGTTGGTTT GGATACTGGC GTACACGGCG CAGAAGTCAT GGCAGAAGGT
TTCCCTGACC GCATGAAGCC TGATTATAAA GGCGCTATCG AGCATTTATA TGAAAACAAA
CGCCTAGGTC AGAAAAACGG CGTTGGTTTC TATAAGTATG AAATGGACAA GCGCGGCAAG
CCAAAGAAAG TGGCTGATGA AGCGACTTAT GAGCTATTAA AAACCACGAC TGATAGCGAC
AAGCAAACGT TTGAAGATCA AGCGATCATC GACCGCACCA TGCTAGCTTT CTGTAATGAA
ACTGTACGTT GCCTAGAAGA CAATATCGTC AGCACGCCGT CAGAAGCAGA TATGGCGATG
ATTATGGGCG TTGGTTTCCC GCCATTCCGC GGTGGTCCTT GCCGTTATAT TGACCAAATG
GGTCTAGATA ACTACTTGGC ACTGTGTGAA AAATACGCAT ACCTTGGCAA AGCCTATGAA
GCCCCGCAAA AAATTCGCGA TATGGCAGCA GCAGGCGAGA CCTTTTACGC TACCGCGTAA
|
|---|
| Protein sequence | MVYQGNRITV TMLEDGIANM QYNAENESVN KFDTETNKQF AEVVNALEKA DDIKGLIVTS
SKGVFIAGAD ITEFVASFKQ SEEEIKDWVI NINDAFNRFE DLPFPKVAAI NGAALGGGCE
MTLVCEYRVM SDKAIIGLPE TQLGIFPGFG GTVRSTRVIG IDNALELIAT GTPKKALDAL
KLGLVDATVA ADDLQDAAID LVKKCISDEL DWQAKREEKL VPVKLNQLEQ AMAFNSAKGM
IFAKANPKQY PAPALAIAAI EKHVNLPRDK AIEVEAAGFA KAAKTPQAES LVGLFLSDQL
VKKLAKQHSK KAHDINEAAV LGAGIMGGGI AYQAASKGLP IIMKDIKSEQ LDLGMGEASK
LLGKMVDRGK ITPAKMGETL SRIRPTLNYG DFAETDIVIE AVVENPNVKR AVLKEVEGLV
KDDCILASNT STISITFLAE ALERPENFVG MHFFNPVNRM PLVEVIRGEK SSEEAISTTV
ALATKMGKVP VVVNDCPGFL VNRVLFPYFG AFDLLLKQGA DFAHVDKVME KFGWPMGPAY
LIDVVGLDTG VHGAEVMAEG FPDRMKPDYK GAIEHLYENK RLGQKNGVGF YKYEMDKRGK
PKKVADEATY ELLKTTTDSD KQTFEDQAII DRTMLAFCNE TVRCLEDNIV STPSEADMAM
IMGVGFPPFR GGPCRYIDQM GLDNYLALCE KYAYLGKAYE APQKIRDMAA AGETFYATA
|
|---|
| |