| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2218 |
|---|
| Symbol | psd |
|---|
| ID | 4033831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2722522 |
|---|
| End bp | 2723355 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637974692 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_581479 |
|---|
| Protein GI | 93007042 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.127421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.151921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAT TTACTACCTT ACAGCAATTT GTCCCGCAGC AAAAAATCAG TAAAGTCGCA
GGGCGCTTAG CTGCCAGCCG CCACCCTTGG GTTAAGCGTA CGTTTATCCG CAGTTTTGCC
AAAGCGTATG ATGTTAGCTT AGATGAATAT GAGCGTCAAA GCCTAAACGC TTATGAGAGC
TTTAATGATT TCTTTACTCG TGAGCTCCAA GACAATGCCC GTATTATCGA TGCCAGTATC
AATGGTATTG TCAGTCCTGC GGATGGCATG ATTTCGCAGC TTGGGCAGAT TCATGACCAT
AAGCTACTGC AAGCCAAAGG TCGTGACTAT GATATCGGTC AGCTCTTAGC TGATAGCGCA
GATGGCGATT ATTTTGCGGA TGGTAGTTTT GCTACGGTCT ATCTTGCTCC AAGCAACTAT
CACCGTGTGC ATATGCCATT TGACGGTATA TTAACCAAGA CCCGCTATGT ACCTGGTACA
CTATTTTCGG TCAATAACAC CACGGCTGCT AATGTGCCGG ATTTGTTTGC TCGTAACGAG
CGCCTTGTCT GTCTGTTTGA TACCGCCTAT GGTAAAGCGG CAGTAGTGAT GGTCGGTGCG
ATGATTGTCG CTGGGATTGA GACAGTAGCG ACGGGTAAAA TTAGCCGTAC CGATGATATT
CAAGAAGCAG ACCATGATAT GAGCTTTAAA AAAGGTGACG AGCTTGGTCG TTTTTATTTA
GGTTCAACCG CAATTGTAGT ACTGCCAAAA GCAGCAAAAA CGGATTGGCA AGATACCATG
CAGCATGGCT CAATCGTTCA AATGGGGCAA CTGTTGGGTA GCGCTAAAAC CTAA
|
|---|
| Protein sequence | MNVFTTLQQF VPQQKISKVA GRLAASRHPW VKRTFIRSFA KAYDVSLDEY ERQSLNAYES
FNDFFTRELQ DNARIIDASI NGIVSPADGM ISQLGQIHDH KLLQAKGRDY DIGQLLADSA
DGDYFADGSF ATVYLAPSNY HRVHMPFDGI LTKTRYVPGT LFSVNNTTAA NVPDLFARNE
RLVCLFDTAY GKAAVVMVGA MIVAGIETVA TGKISRTDDI QEADHDMSFK KGDELGRFYL
GSTAIVVLPK AAKTDWQDTM QHGSIVQMGQ LLGSAKT
|
|---|
| |