| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2197 |
|---|
| Symbol | |
|---|
| ID | 4035024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2700913 |
|---|
| End bp | 2701758 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637974671 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_581458 |
|---|
| Protein GI | 93007021 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0700443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00932222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA TGAATCTGCG CACTGCTATT TTTGGCGCAC CGCGCCGTAA CGCGATAGGC
ATTATATTAA TGTCGAGCAT TGTCACGACT GGCTGTACCA CCAATTATTT GACCAATAGT
ACAGAAGGTA CTTATGGCGT GCCCATGACT GAGCGCACTA TTCCGCAGCG TCTGCTTGAT
CGTAGTATTG AGCATACCGT CAAGATTAAC GTTTATGGTT TGCAGGAAAA TTTGCAGCAA
ACCAGTCGCA TGAGTATTGA TAGCTTTAAT AGTATTGTAT TACTGACCGG TGAAGTGCCG
ACTGAAACAA TTAAGGCAGA AGTCAGTAAA GTCGTAGGCT CTATGCCAGA TGTTCGTCAA
GTCTATAATG AGCTGACAGT TGGTGCTTCA AAAGGCTATA GCCAAACTGT CCATGACGGT
TATATCACCT CAAAGCTGAT GGCAAAAACA GCCGCTGCTG ATGGGGTAAA AGCGTCACAA
ATTAGAGCAG TGACCAATAA TGGCGTGGTT TATATCATGG GTCGTATGAC ACCGACGCAG
CAAAGCCACC TGATTGATAT TGCCAATAGC ACGGTTGGTG TTACAGAATT GGTACTACTG
ACTACTGTCG TCGATGATCG AGGCGTAAAG CTGGGTAACG ATGACATCAT GTATGAGGCC
AATGCTGCAA ATTCAGCCCA TCCAACTAGA GTTGCAGTCG TTAATAACAG AGCAATATCT
AATACTAGTG GTTCTGTCGC AGCAGATGCG ACTATCAGTG CCACACCTAT TATAGTGACC
GAAGATGGCT CACCAGTTAC CGAGCCTTCA TCCAGCCCTT ACATTGACCT GTATCAAAAC
CCATAG
|
|---|
| Protein sequence | MTQMNLRTAI FGAPRRNAIG IILMSSIVTT GCTTNYLTNS TEGTYGVPMT ERTIPQRLLD
RSIEHTVKIN VYGLQENLQQ TSRMSIDSFN SIVLLTGEVP TETIKAEVSK VVGSMPDVRQ
VYNELTVGAS KGYSQTVHDG YITSKLMAKT AAADGVKASQ IRAVTNNGVV YIMGRMTPTQ
QSHLIDIANS TVGVTELVLL TTVVDDRGVK LGNDDIMYEA NAANSAHPTR VAVVNNRAIS
NTSGSVAADA TISATPIIVT EDGSPVTEPS SSPYIDLYQN P
|
|---|
| |