| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2176 |
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| Symbol | |
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| ID | 4036007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 2670501 |
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| End bp | 2674700 |
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| Gene Length | 4200 bp |
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| Protein Length | 1399 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637974649 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_581437 |
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| Protein GI | 93007000 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.120941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCC CTACCAGCAA TGGTAACCAT GAGTTTGATA GCATCCAAAT TACCTTGGCA
TCGCCTGACG TTATTAAGTC ATGGTCGCAT GGTGAAGTAA AAAAACCTGA AACCATTAAC
TACCGTACGT TCAAACCTGA GCGTGATGGT CTTTTTTGTG CCAAAATTTT TGGTCCAGTA
AAAGATTTTG AATGTTTATG TGGTAAATAC AAGCGTCGTA AGTTCCAAGG CGTTATCTGT
GAAAAATGTG GCGTTGAAGT CACTACTGCT AAAGTTCGTC GTGACCGCAT GGGTCATATC
GATTTAGCGA GCCCTGTTGC GCATATTTGG TTCTTAAAAT CATTGCCAAG CCGCATCGGT
CTATTGCTAG ACATGACACT TCGTGATATC GAACGCGTTT TGTATTTTGA AAGCTACATC
GTGACTGAGC CAGGTCTGAC CTCTTTAGAG AAGTATCAGC TGCTTGATGA CGAAGATTAT
TATAAAGCCC TTGAAGAATT TGGCGATGAA TTTACTGCAA AAATGGGTGC TGAAGCGGTT
CAAGACCTTT TAAAAGATAT CGATTTAGAT TTAGAGATTG ATGAGCTACG TGAAGCGATT
CCGCAAACGG GTTCTGAAAC CAAGCTTAAA AAGATGTCTA AGCGTCTTAA ATTATTAGAA
GCATTCCGTG ATTCTAATAA CAAGCCTGAG TGGATGGTAA TGAATATCTT ACCAGTATTA
CCACCAGATT TGCGTCCGCT AGTACCACTA GAAGGCGGTC GTTTCGCAAC ATCAGATTTG
AACGATTTAT ATCGCCGTGT TATTAACCGT AATAACCGTC TAAAGCGCCT ACTTGAGCTA
AGCGCTCCTG ATATCATCGT ACGTAACGAA AAACGTATGT TGCAAGAATC AGTAGATGCC
TTGCTTGATA ACGGTCGCCG CGGTCGAGCT ATTACTGGTA GTAACAAGCG TCCATTGAAG
TCTTTGGCTG ATATGATCAA AGGTAAGCAA GGTCGTTTCC GTCAAAACTT ACTAGGTAAA
CGTGTTGATT ATTCTGGTCG TTCGGTGATC GTTGTTGGTC CAACCCTACG TCTACATCAG
TGTGGTCTAC CAAAGAAAAT GGCACTTGAA TTGTTCAAGC CATTTACTTA TAACAAACTA
TTGTCTCATG GTTTGGCGAC AACGATTAAA GCTGCCAAAA AGATGGTAGA GCGTGAAGAG
CCACAAGTGT GGGATATGCT GGCCATGGTT ATCCGTGAGC ATCCAGTACT CTTGAACCGT
GCGCCAACGC TTCACCGTTT GGGTCTACAG GCATTTGAGC CAGTACTAAT CGAAGGTAAA
GCGATTCAGC TCCATCCTCT AGTTTGTACC GCATTCAACG CCGACTTTGA TGGTGACCAA
ATGGCCGTTC ACGTGCCATT GACACTAGAA GCTCAGCTTG AATCTCGTGC GCTCATGATG
TCGACCAACA ACATCTTGTC TCCTGCGAAC GGTGAGCCAA TCATCGTACC ATCACAGGAT
GTTGTATTGG GATTGTATTA CATCAGCCGC TCGTCAGTAA ATGCCAAAGG CGAGGGCATG
ATTTTTGCCA CCGTTAATGA AGCATTGCGT GCAATTGGTT CAAACGATTT ACATGTTAAC
GCCAAGATTA AAGTTCGTGT CACTGAAACG CATATTGATG ATGATGGCAA TCGTACTAAA
GAGACGAGTA TCAAAGATAC TGTTGCTGGT CGTTTGTTAA TCTGGAACAT CATGCCTGTT
GGTATGTCGT TTGACGAATG TAATGAAGAG ATGACTAAGA AGAATATCTC TAAATTGATC
AACTCTTGCT ACCGTAAAGT GGGCGTAAAA GAAAGTGTTA TGTTTGCTGA CCAATTGATG
TATCTTGGTT TTGCACAAGC GACACTATCT GGTGTGTCTA TCGGTATCGA TGACATGGTT
ATTCCACCAC TGAAAAAGCA AATCATCGAA GTCGCTGAAG CTGAAGTGCG TGAAATTGAA
GACCAGTTTG AGCAAGGCTT TGTAACGGCT GGTGAGCGTT ATAATAAAGT GGTCGATATT
TGGTCACGTA CCAATGACAA AGTCGCTAAA GCGATGATGG ACAACTTAGC GACTGATAAA
ATTATCAACG CCAAAGGTGA AGAAGAAGAG CAGAAGTCAT TTAACTCTAT CTTTATTATG
TCAGATTCTG GTGCTCGTGG TAGTGCGGCT CAGATTCGTC AGCTTGCTGG TATGCGTGGT
TTAATGGCTA AGCCAGATGG CTCAATCATT GAAACACCGA TTAAAGCTAA CTTCCGTGAA
GGTTTGACCG TACTTCAGTA CTTTATCTCA ACGCATGGTG CGCGTAAAGG TCTTGCGGAT
ACGGCATTGA AAACAGCTAA CTCAGGTTAC TTGACGCGTC GTTTGGTTGA CGTAGCACAA
GATTTGGTTA TTACCAGTGA TGACTGTGGT ACTGAGCAAG GTTTGCTAAT GAAGCCACAT
ATCCAAGGTG GTGAAATCAT TGAGAAGTTA GGCGAGCTAG TACTAGGTCG TGTAACAGCA
CGTGATGTCA CTTATAACGA TAATGCTGAA AAAATCTTGA TTCCAGCGGG TACGTTGATC
GATGAGCATT GGGTTAAAGT ACTAGATAAC AATGCAATCG ATGATATCTG GGTACGTTCA
GTGATTACTT GTAATATCGA ACATGGCGTT TGTTCACAGT GCTATGGTCG TGACCTTGCT
CGTGGTCATA AAGTGAATAT CGGCGAGTCT GTTGGTGTTA TGGCGGCGCA GTCTATCGGT
GAGCCTGGTA CTCAGTTGAC CATGCGTACT TTCCACGTTG GTGGAGCGGC AAGTTCTGCT
TCTGTGGACA ACAGCATTTC AGTTCGTAGT GCTGGTCAAG CGCATTTTGA AAACATGAAG
ACTGTACAGC ATACCGATGG TCATTTGGTT ATCGTATCGC GTTCAGCTGA AATCGCCTTG
ACTGACGAGC TTGGTCGTGA GCGTGAGCGT TATAAAGTAC CTTATGGTTC AAGCGTTCTT
GTGAAAAATG AAGACCAAGT TGAAGGCGGT CAAACCATCG CTAAGTGGGA TCCGCACACG
CATCCTATTA TTACAGAATT CGCGGGTACC GCACGTTTCA GTGAAATCAC TGATGGCTTA
ACTGCTACCG TAAAAGTTGA TGATGCGACT GGTATGAGCT CGTTTGAGAT TCTAGCTACT
CGAGATCGGT CAAGCTCAGC AAAAGACTTA CGTCCGGCGA TTATCTTGAA CACAGACGAA
GGTAAAGAAG TCGTTTATTT CTTACCTGCT GAAACTATCA TTCGTGTTAG CGACGGTGAG
AAAGTTGCAG CCGGTTCGAT TCTAGGTCGT GTACCACAAG CGTCTTCAGG TACCAAAGAT
ATTACCGGTG GTCTGCCACG TGTAGCTGAT TTATTCGAAG CACGTCGTCC AAAAGATCAC
GCTATCATGG CTGAAATGAC GGGTGTTGTT AGCTTTGGTA AAGAAACCAA AGGTAAAAAT
CGCTTCATTA TTACTAATGA AGATGGCGAG ATTCATGAAG AGCTAATCCC GAAATGGCGT
CAGATTAACG TCTTCGAAAA CGAAACTGTT GCTCGTGGTG AGGTTATTGC TGATGGTCCA
CAGAATCCGC ATGACATCTT ACGTCTGAAA GGACAAACTG CGCTTGCTGA CTATATCGTT
AACGAAGTAC AGGACGTTTA TCGTCTGCAG GGCGTAAAAA TCAATGACAA GCACATCGAA
GTTATCATTC GTCAGATGTT GCGTAAAGTT GAGATTACTG ATGGTGGCGA TTCAAACCAC
TTTAAAGGTG ATCAAGTAGA ATATGCTGAT ATCAAAGCAT TGAATGCCAA GCTAGAAGCG
GAAGACAAAT TTCCAGTTCA GTTTGAACGT CAATTACTTG GTATTACCAA AGCAAGTTTG
GCAACCGAAA GCTTTATCTC AGCCGCATCG TTCCAGGAAA CGACACGTGT CCTAACGGCT
GCTGCGGTCA CTGGTAAAGT GGATGAGTTA CGTGGTCTGA AAGAAAACGT AGTCGTTGGT
CGCTTGATTC CAGCTGGTAC TGGTCTTGCT TATCATAAAG CTCGTAAAGA AAAAGCAGAG
CAAAAACTGC AAGATAAAGA CTTAAATGCG GCGTTTGATA TGTCAGCAAC GACTGATGCG
ACAGACTTTG CAAGCTTCGA TGAAGCCTTT GCTCAAGAGT TGAATCAAGG TAATCATTAA
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| Protein sequence | MQSPTSNGNH EFDSIQITLA SPDVIKSWSH GEVKKPETIN YRTFKPERDG LFCAKIFGPV
KDFECLCGKY KRRKFQGVIC EKCGVEVTTA KVRRDRMGHI DLASPVAHIW FLKSLPSRIG
LLLDMTLRDI ERVLYFESYI VTEPGLTSLE KYQLLDDEDY YKALEEFGDE FTAKMGAEAV
QDLLKDIDLD LEIDELREAI PQTGSETKLK KMSKRLKLLE AFRDSNNKPE WMVMNILPVL
PPDLRPLVPL EGGRFATSDL NDLYRRVINR NNRLKRLLEL SAPDIIVRNE KRMLQESVDA
LLDNGRRGRA ITGSNKRPLK SLADMIKGKQ GRFRQNLLGK RVDYSGRSVI VVGPTLRLHQ
CGLPKKMALE LFKPFTYNKL LSHGLATTIK AAKKMVEREE PQVWDMLAMV IREHPVLLNR
APTLHRLGLQ AFEPVLIEGK AIQLHPLVCT AFNADFDGDQ MAVHVPLTLE AQLESRALMM
STNNILSPAN GEPIIVPSQD VVLGLYYISR SSVNAKGEGM IFATVNEALR AIGSNDLHVN
AKIKVRVTET HIDDDGNRTK ETSIKDTVAG RLLIWNIMPV GMSFDECNEE MTKKNISKLI
NSCYRKVGVK ESVMFADQLM YLGFAQATLS GVSIGIDDMV IPPLKKQIIE VAEAEVREIE
DQFEQGFVTA GERYNKVVDI WSRTNDKVAK AMMDNLATDK IINAKGEEEE QKSFNSIFIM
SDSGARGSAA QIRQLAGMRG LMAKPDGSII ETPIKANFRE GLTVLQYFIS THGARKGLAD
TALKTANSGY LTRRLVDVAQ DLVITSDDCG TEQGLLMKPH IQGGEIIEKL GELVLGRVTA
RDVTYNDNAE KILIPAGTLI DEHWVKVLDN NAIDDIWVRS VITCNIEHGV CSQCYGRDLA
RGHKVNIGES VGVMAAQSIG EPGTQLTMRT FHVGGAASSA SVDNSISVRS AGQAHFENMK
TVQHTDGHLV IVSRSAEIAL TDELGRERER YKVPYGSSVL VKNEDQVEGG QTIAKWDPHT
HPIITEFAGT ARFSEITDGL TATVKVDDAT GMSSFEILAT RDRSSSAKDL RPAIILNTDE
GKEVVYFLPA ETIIRVSDGE KVAAGSILGR VPQASSGTKD ITGGLPRVAD LFEARRPKDH
AIMAEMTGVV SFGKETKGKN RFIITNEDGE IHEELIPKWR QINVFENETV ARGEVIADGP
QNPHDILRLK GQTALADYIV NEVQDVYRLQ GVKINDKHIE VIIRQMLRKV EITDGGDSNH
FKGDQVEYAD IKALNAKLEA EDKFPVQFER QLLGITKASL ATESFISAAS FQETTRVLTA
AAVTGKVDEL RGLKENVVVG RLIPAGTGLA YHKARKEKAE QKLQDKDLNA AFDMSATTDA
TDFASFDEAF AQELNQGNH
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