Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_2167 |
Symbol | aroB |
ID | 4035998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2659372 |
End bp | 2660481 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637974640 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_581428 |
Protein GI | 93006991 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.563786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.738414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC CACTGTTTCA TGCTGACTTG ACAGTACATA CGCAAAGTCA TGACTATCCA ATCGTCATTA CTGAAAACGC AATAGCAGAA AATAGCAGTA TGGCTAGCCA AGTTGCCCCT TATATTACAG GTCGTCAAGT CCTTATCGTC ACCAATGAAA CGGTTGCGCC TTTATATTTA AAGGCTTTAC AAGAGGAACT TGAAGCGCAG TTTACCGTGC AGGTGTGCGT GCTGCCAGAT GGCGAACAAT ATAAGAACCA GTCGAGTATC AATCAGATTT ATGATGTGTT GATGGCAGTG CATTTTAATC GTGATGTGAC TTTGATTGCG CTTGGTGGTG GTGTCATTGG TGATATGACG GGATTTGCAG CAGCAAGCTT TATGCGCGGC GTCAATTTTA TTCAGATACC AACCACCTTG CTGTCTCAAG TGGATTCAAG CGTCGGCGGC AAAACCGGTA TCAATCATCC GCAAGGCAAA AACATGATTG GCGCATTCTG GCAGCCGCAA ATGGTATTGG CAGATATGAG TACACTCAAA ACCCTGCCAG CGCGCGAGCT GTCAGCAGGG CTTGCTGAAG TTATTAAATA TGCGCTGATT ATGGATGCCG AGTTCTTGAC TTGGCTTGAG CACAATCTGC CTGCGATGAT GGCTTTGGAT CTAGCGGTAC TGGGTGAAGC GGTGAAGCGC TGCTGCCAGT ACAAAGCTGA TGTTGTCGCC CAAGATGAAA GAGAATCAGG TGTACGCGCT TTATTAAATT TTGGTCATAC GTTTGGTCAT GTGATTGAAA CTCATGAAGG TTATGGTAGT TGGCTACATG GTGAGGCAGT TGCTGCGGGC ATGGTACAAG CGGCTGAGCT GTCGCAAAAA ATCGGCTGGT TAACGAGCGA TGAGGTTGCT TGTGTTAAGC GCATATTGTC ATTAGCCAAT TTACCGATCA CGCCGCCGCC TATCGAAGTT CAGACAGCTT TGGACTTAAT GGGGCATGAT AAAAAAGTGA AACACGGACA AATCCGCCTT ATTTTGTTAA AATCATTGGG TGAAGCAGTA TTAACCAATG ATTTTGACCC GCATCTGCTC ACCGATGTGC TAGCCACGCA TGCACCGTAA
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Protein sequence | MATPLFHADL TVHTQSHDYP IVITENAIAE NSSMASQVAP YITGRQVLIV TNETVAPLYL KALQEELEAQ FTVQVCVLPD GEQYKNQSSI NQIYDVLMAV HFNRDVTLIA LGGGVIGDMT GFAAASFMRG VNFIQIPTTL LSQVDSSVGG KTGINHPQGK NMIGAFWQPQ MVLADMSTLK TLPARELSAG LAEVIKYALI MDAEFLTWLE HNLPAMMALD LAVLGEAVKR CCQYKADVVA QDERESGVRA LLNFGHTFGH VIETHEGYGS WLHGEAVAAG MVQAAELSQK IGWLTSDEVA CVKRILSLAN LPITPPPIEV QTALDLMGHD KKVKHGQIRL ILLKSLGEAV LTNDFDPHLL TDVLATHAP
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