Gene Pcryo_2119 details

Gene Information

• Locus tag: Pcryo_2119
• Symbol: radC
• ID: 4034778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Psychrobacter cryohalolentis K5
• Kingdom: Bacteria
• Replicon accession: NC_007969
• Strand: +
• Start bp: 2592883
• End bp: 2593566
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637974592
• Product: DNA repair protein RadC
• Protein accession: YP_581380
• Protein GI: 93006943
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAATCA AAGACTGGCA TGAGGATGAT AGACCGCGTG AGAAGCTATT AAAATTTGGC 
GCCGCGCACT TATCCGACGC TGAGATATTG GCGATATTTC TGCGCACGGG CACACAGTCG 
CAGTCAGCCA TTGAGCTGGC TCGCCATCTG ATCGAGCAAT TTGGTAGCCT TGCAGAGCTG 
TTAGCAGCGC CGCAAGAAAC TGTCCTTGCT TGTCACGGCA TCGGTCCTGC CAAATACGCG 
CAGATACTCG CCTCACTTGA AATGGGCAGA CGCTATTTGG ACAGTCAGCT TAAAACGGGT 
CAAGGACTTG GACGCTCGCA AATGGTCAAA GACTATATCA GCACTCAGTT GCGCGGTGAG 
CCGCGAGAAG TGTTCGCTGT GCTATGTTTG GACAATGCCT TGAATCTAAT CAATTTTGAG 
ATATTGTTTA CAGGCGGCAT CTCTTCTTGC TCCGTCTGTA TCAAGCATGT GCTACGTCAT 
GCGTTAAGCC ATGCAGCAAG CCAGCTCATT ATTGCTCACA ACCATCCGCA TACCGATGCT 
AAGCCATCAA CGGCGGATAA CTTGTTAACC TATGAGCTCA AAAAAGCTTG TGACCTTATA 
GATTTGTCTT TGATTGACCA TGTCATCGTT GGGCGCAATG AGACTTTATC TTATGCTGAA 
AACAGTTTAC CGCCTTTTAA CTAA 

 

Protein sequence

MAIKDWHEDD RPREKLLKFG AAHLSDAEIL AIFLRTGTQS QSAIELARHL IEQFGSLAEL 
LAAPQETVLA CHGIGPAKYA QILASLEMGR RYLDSQLKTG QGLGRSQMVK DYISTQLRGE 
PREVFAVLCL DNALNLINFE ILFTGGISSC SVCIKHVLRH ALSHAASQLI IAHNHPHTDA 
KPSTADNLLT YELKKACDLI DLSLIDHVIV GRNETLSYAE NSLPPFN