Gene Pcryo_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2113 
Symbol 
ID4035603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2586715 
End bp2587356 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID637974586 
Productheme exporter protein CcmA 
Protein accessionYP_581374 
Protein GI93006937 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGTT GTATGACGGC TCTGAATACC GCCTTACTTG CGCTTGATGA GCTGACCGTT 
CAGCGTGGTG AAATCCCTCT ATGTGAAGGG GTGTCACTCA AGTTGTCTGC AGGCAGCATT
TGCCATCTAA TTGGTGCCAA TGGTACCGGC AAGACCACGT TACTTATGCA ACTGGCTGGA
TTATTGCCAG TGCTAACAGG TGAGACTTAT TATCAAGGGG CAGTTAGCTT ACCGATTCAG
CCTTTGTATG TATCGCATCA ATTGGGCATT CATCCCAATC TCACTGTTGC TCAAAATCTC
ACCTTTTTGC TGAATTTATA TGGTATCACA CCAAGCGCTG CTGATATTGA TGACGCCCTC
ACTTGGGTAG GATTACAAGG GTTTGAAACC ATAAGCTCAA GTCATTTATC CGCGGGTCAA
ACTCGAAGAA TTACCCTTGC GCGGTTATAC TTACTGACGC CTGAAGTGAC GCCATTATGG
TTGCTTGATG AGCCATTCAC CGCACTCGAT GTTGATATGG TAGCCCGCAT GGAAGACCGA
TTACGCGATT TTGCTCATGA AGGCGGGGCG ATATTAATGA CCAGTCACCA GGCAGTCGAC
GTTGCCAATC AAGTGCTCGA TTTGTCCGAT TACATGGTAT GA
 
Protein sequence
MRGCMTALNT ALLALDELTV QRGEIPLCEG VSLKLSAGSI CHLIGANGTG KTTLLMQLAG 
LLPVLTGETY YQGAVSLPIQ PLYVSHQLGI HPNLTVAQNL TFLLNLYGIT PSAADIDDAL
TWVGLQGFET ISSSHLSAGQ TRRITLARLY LLTPEVTPLW LLDEPFTALD VDMVARMEDR
LRDFAHEGGA ILMTSHQAVD VANQVLDLSD YMV