Gene Pcryo_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2112 
Symbol 
ID4035602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2585943 
End bp2586668 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content46% 
IMG OID637974585 
Productcytochrome c-type biogenesis protein CcmB 
Protein accessionYP_581373 
Protein GI93006936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01190] heme exporter protein CcmB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAA CAGACAGTTC ATTATCAATC ATAAATGCTC ATACAGCTGA TGTGCGCAGT 
ATCAGTTTTA TGCAGCTGTG GCGCCGTGAG TGGCAAGTAA AGCAGCAGGG AGCGGTACAG
TGGTTATATC CTTTGGTGCT ATTTTTAGTA ATCATTACCT TGTTTCCGCT AGCGGTTGGA
AGCGAGCCTG CACTATTACA GCGCCTTGGG GTGTCGGCGG TGTGGATTGC TGCTTTATTG
TCATTAGTGA TGGGCGTTGA TGGTTTGTTT AAGCCCGCGC TTGATAATGG CACATTGGCG
CAATTGGTTG TCGCCAAAGC GTCGCTGCCG TTATGGGTGC TTATCCGTTT GGTGATTCAT
TGGATTTTTA GTAGCGGCAT TGTGGCGGTA TTAAGTCTGC TTGCTGTGCC TTTATTTCAG
CTGAGTTGGT TTGAGGCATG GATATTGATG GCATCAATTG TTACAGGTAG TCCGATGCTG
TTAATGCTGT CAGCGGTTGC TAGTAGTTTG ACGTTATCAT TGAAGAATGG TGCTGTGCTA
GTGCCTTTAA TCGCTTTGCC GATGCAGTTG CCGGTATTGA TTTTTGCCAC CGGTGCGGTT
GATTTATTTG CTACGGGTCT TAACGGTCTG CCTATTTTGG CGTTGTTGCT GGCAGGCAGT
ATTATCTCGG TGCTAGTGAT GCCATGGGCG ATTGCTATGA CGTTAAAAAT GTCGTGGTTG
AATTAA
 
Protein sequence
MIETDSSLSI INAHTADVRS ISFMQLWRRE WQVKQQGAVQ WLYPLVLFLV IITLFPLAVG 
SEPALLQRLG VSAVWIAALL SLVMGVDGLF KPALDNGTLA QLVVAKASLP LWVLIRLVIH
WIFSSGIVAV LSLLAVPLFQ LSWFEAWILM ASIVTGSPML LMLSAVASSL TLSLKNGAVL
VPLIALPMQL PVLIFATGAV DLFATGLNGL PILALLLAGS IISVLVMPWA IAMTLKMSWL
N