| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2047 |
|---|
| Symbol | |
|---|
| ID | 4034914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2516020 |
|---|
| End bp | 2517513 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637974519 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_581308 |
|---|
| Protein GI | 93006871 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.731125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTA CTGTATTCAA TCCCCGCATC GATGACGCTG CTGCCTCTGA CATTACCGCT
GTCACGCCTG TGATCACCGC ACTCAATGAA CTAAGTTCAG CACAAGCTCC TGTCGAAAAA
GCAGCTACCA AAAAGGTGTT TGTCACCACC CAAGGCTGTC AGATGAATGT CTATGACTCG
GGCAAAATGC TTGATGTGCT TGGTGACTCA CATGGCATGG AAGTGACGCA TAATATCGAC
GAAGCCGATG TACTGCTGAT GAATACTTGC TCCATTCGCG AAAAAGCCCA AGAAAAAGTC
TTTTCAGAAT TGGGTCGCTG GCGCAAATTG AAAGAAAAAC GCCCTGATCT TGTTATTGGT
GTTGGTGGTT GTGTGGCTTC GCAAGAAGGC GATAACATTC AAAAGCGCGC GCCTTATGTC
GATATGGTAT TCGGTCCGCA AACGTTGCAC CGTTTGCCAG AGCTGTATGA CCAATCGCAT
CAACAGCGTG AGATTGCGCC TAAGAACCGT ATTGGTACGG TGGATGTATC CTTCCCAAGT
ATCGAAAAGT TTGATTTTTT ACCAGAGCCA AGAGTAGAAG GATTTAAAGC TTTTGTTTCC
ATTATGGAAG GCTGCTCTAA GTATTGCTCA TTCTGCGTCG TGCCTTATAC ACGTGGTGAA
GAATTGTCAC GTCCACTGGA CGATGTATTG GCTGAAATTG ACAGCTTAGC GGCACAAGGT
GTGCGTGAAA TCAATCTACT CGGTCAAAAC GTTAATGGCT ATCGCGGCGA AAAAGACGAT
GGCAGTATTT GCCGTTTCGC AGAACTCTTA CATTATGTGT CACACGTCGA TGGTGTTGAG
CGTATTCGTT ATACAACCAG CCATCCGCTA GAGTTCACTG ATGATATCAT TGACGCTTAC
GCGCAACTGC CAGAGCTGGT ATCACACTTG CATCTGCCTG TACAAAGCGG CTCAAATGCG
ATATTGGCAG CAATGAAGCG CAATCATACG ATTGATGTTT ATATCAATCA AATTAATAAG
CTCAAAGCCA TACGCCCTGA TATTCACTTA TCAAGCGACT TTATTATTGG CTTTCCAGGT
GAGACAGATC AAGATTTCCA AGATACGCTG AACTTGGCAA AAGAGTTAAA CTTTGATCAC
TCTTATAGCT TTATCTATTC TAAGCGTCCA GGTACGCCAG CAGCAGAACT ACCGGACGAT
GTGAGCTTCA AAACTAAGAA AGAGCGCTTG GCAGAATTCC AAAAAGTTAT TATCGACTCA
ACGCTTGCTA AAACCCATGA GATGGTCGGC ACCACGACTC GCGTATTAGT TGAGCAAGTC
GCCAATCGTC ATCCTGATTG TTTAATTGGT ACAGCAGACA ATACCCGTAC CGTAATGTTC
CCTTACGATG TTGATAAAAT GGATGAGATG TTGGGTAAAA TTGTGAGTGT ACGTATTACT
GATTTTGTGA GTCCGCACAT GGTAAAAGGC GAGATTGAAG CAGTTTTAGC TTAA
|
|---|
| Protein sequence | MSVTVFNPRI DDAAASDITA VTPVITALNE LSSAQAPVEK AATKKVFVTT QGCQMNVYDS
GKMLDVLGDS HGMEVTHNID EADVLLMNTC SIREKAQEKV FSELGRWRKL KEKRPDLVIG
VGGCVASQEG DNIQKRAPYV DMVFGPQTLH RLPELYDQSH QQREIAPKNR IGTVDVSFPS
IEKFDFLPEP RVEGFKAFVS IMEGCSKYCS FCVVPYTRGE ELSRPLDDVL AEIDSLAAQG
VREINLLGQN VNGYRGEKDD GSICRFAELL HYVSHVDGVE RIRYTTSHPL EFTDDIIDAY
AQLPELVSHL HLPVQSGSNA ILAAMKRNHT IDVYINQINK LKAIRPDIHL SSDFIIGFPG
ETDQDFQDTL NLAKELNFDH SYSFIYSKRP GTPAAELPDD VSFKTKKERL AEFQKVIIDS
TLAKTHEMVG TTTRVLVEQV ANRHPDCLIG TADNTRTVMF PYDVDKMDEM LGKIVSVRIT
DFVSPHMVKG EIEAVLA
|
|---|
| |