| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2046 |
|---|
| Symbol | |
|---|
| ID | 4034913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2513337 |
|---|
| End bp | 2515544 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637974518 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_581307 |
|---|
| Protein GI | 93006870 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.490447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC CGCAGGTTGC TCCTGATATG ATTGATAAAA ACACCTATCA AAATGACACA
CATAAGAGTT CTAAAAAAAT GACGCTTAAA AAAAGCGCGC TGAGCTTGGC AGCGGCTGTC
GGTGCTTTGG GCTTTTCGCA AGTAGCCTGT GCAGAATTGA CATGGGGTGA GAGCGGCAGT
TCTGAGCAAC AAGGCAAATA TCAAGTAGAG CGCTATCAGC CTGATGGCTA TCAACCAAAC
AGTCAACAAA ACACTTCTCA ACAAAGTACT TTTCAACAAA ACAATGCTTA TCAACCAGAC
AATGGGGTGG GTTCATTCAC CGCAGCAGCC ATTGCGGCAG AGCGCGGTGA TGTCAATGCG
CTTTATAATT ATGAGCAAGC TATGAGCGGT GGCTTATTTG CCATGTATCC TACTTACTGG
CGGATGAATG TAGATTTGAA TTCGCAAAGC CCTGCGGCAG TGTCGCAGTT TGTGCGCCAA
TATCCAGATA CGGTCATGGC AGAAAAACTG GCCGCTGATT TTGCTGAAAC CAAAGCGGGT
TCAAATGATT ATGCTGCCGT GCGCCAAGTG GCAAATCTGA TCACCAATGC CGATGACAGT
GAGAAGTGCG CCGTTGCGCT TGGGTTTAAT AATGGCGGCG ATACCATGCG TGCTATGGCA
GCGAAGTCTG ATGTCTGGTT GACGACCAAA AAACAGCCAG CTCTATGTGA TCAGCTAGCG
CTTGAGATGA ATAACAATGC CTTAATTAGC AATCCAGAGA GAGTCTCTCG CCTCAAACGT
ATGCTGCGTA AAGGCAAAAC CGGTGATATC ATGGCGTTAT CTTCGCGCTT AGGTATGCCC
ATTCCTTATG CATCACTGAG TGACATCCAG CTTAATCCAT CATCGTTCTT TAGCCGTTTC
GCCCGCGAAC CTGCCAGCCA AACCAATCAA TATTTGTATC TTTATGCGAT GGGACGTGTC
GCCGAAAAGT CTTATCGTGA GGCGGCGTTG CAGTTAGAGT TTGATATAAA GCAAGACAAT
CAGCGTTCAG CCAAACTGTT AACCGATGAT ACTCGCCGCG CAGCTTATCG TACTCTTGGT
GTACAGCGCA TGAATCACAA TACCGATGAT GGCTTTAACG TTGAAGCCGT CGACTGGTTC
CGTAACAGCT TAGACAGTGA CTTTAGTTTT GAAGAAGCAG AATATTATGC CATGGCAGCG
ATTCGTTTTA GTCGCTGGGA TGATGTGGTC GAAGCCATCT CAAGAATGGA TGCCGAAACC
CAAAAAGCCA ATCAATGGCA GTATTGGTTG GCACGCGCTT ATGAGCAGTC AAATGATGGC
AACAAGCGCA ATACTGCTAA GAAAATGTAT CAAAATCTCG CTAAAAGTAA CGAATATTAT
GGTTTGATGG CAAAGGAAAA AGTTGGTCAA CGTTTTGATG CCAGCCGTTT GGGTGGTAGT
AATTTACCTA ATGTCAGTAG CGCTGATCGT GCGCGCGTCA TGCAAAATCA ACATTTTGCC
CGTGCATTTG CGTTATATAA CGCTGATGCC AGCCGAGCTT ATGCCAATCG TGAGTGGAAC
TGGGCGGTCA AAAAAGCACG TGATAACCGT GATGAAAAAT TAATCATTGC AGCAGCGCGT
CAAGCCTATG ATATGGGCTG GCTAGACCGT GCGATATATG CCATTGACAA TACTGACAAC
GTCAATAGTC TTGCAATATC GCATCCGATG CCGCACCAAG ATGCTGTAGT ACGCTATAGC
CAGTCGGCTG GTATCGATCC CGCTTGGGCA TATGGCATCA TGCGTCAAGA GAGCCGATTT
GTAGCCTCTG CGCGCTCAAA TGTCGGCGCA AGTGGACTTA TGCAAGTCAT GCCAGATACC
GCAAAATATA TTGCTCGCAA TTTGGGCGAG ACATATAGCG CAAGTCGTGC CAATAGCGGT
GATACCAATA TCCGTTATGG TACATGGTAT ATGGGTGATA TCTTTGGGAA GCTAAACAGT
CAGCCTGTAT TGGCGACGGC GGGCTACAAT GCTGGTCCAA ACAATGCCAA GCGTTGGCAG
CCAACCTATG GCTCATTGGC AGCGGATCAG TACGTTGAGT CTATTGCTTT TCCTGAAACA
CGGAATTATG TCAAACATGT GATGGAAAAT GCCACCATCT ATAGCAGCTT ATTGGGTAAT
GGTCAGCCAA TCACTCAGCG TATGGGTACC GTACCTGCCG CATTTTAA
|
|---|
| Protein sequence | MKKPQVAPDM IDKNTYQNDT HKSSKKMTLK KSALSLAAAV GALGFSQVAC AELTWGESGS
SEQQGKYQVE RYQPDGYQPN SQQNTSQQST FQQNNAYQPD NGVGSFTAAA IAAERGDVNA
LYNYEQAMSG GLFAMYPTYW RMNVDLNSQS PAAVSQFVRQ YPDTVMAEKL AADFAETKAG
SNDYAAVRQV ANLITNADDS EKCAVALGFN NGGDTMRAMA AKSDVWLTTK KQPALCDQLA
LEMNNNALIS NPERVSRLKR MLRKGKTGDI MALSSRLGMP IPYASLSDIQ LNPSSFFSRF
AREPASQTNQ YLYLYAMGRV AEKSYREAAL QLEFDIKQDN QRSAKLLTDD TRRAAYRTLG
VQRMNHNTDD GFNVEAVDWF RNSLDSDFSF EEAEYYAMAA IRFSRWDDVV EAISRMDAET
QKANQWQYWL ARAYEQSNDG NKRNTAKKMY QNLAKSNEYY GLMAKEKVGQ RFDASRLGGS
NLPNVSSADR ARVMQNQHFA RAFALYNADA SRAYANREWN WAVKKARDNR DEKLIIAAAR
QAYDMGWLDR AIYAIDNTDN VNSLAISHPM PHQDAVVRYS QSAGIDPAWA YGIMRQESRF
VASARSNVGA SGLMQVMPDT AKYIARNLGE TYSASRANSG DTNIRYGTWY MGDIFGKLNS
QPVLATAGYN AGPNNAKRWQ PTYGSLAADQ YVESIAFPET RNYVKHVMEN ATIYSSLLGN
GQPITQRMGT VPAAF
|
|---|
| |