| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2039 |
|---|
| Symbol | |
|---|
| ID | 4035412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2506030 |
|---|
| End bp | 2507580 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637974511 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_581300 |
|---|
| Protein GI | 93006863 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0629584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA GTCGGTTATT TCGTTCAACC ATGGTAGTCA GCAGTATGAC CATGCTATCT
CGTATTTTAG GTCTGGTACG CGATATCGTA TTACTAGGTG TCTTTGGCGC TGGCGGTCTG
ATGGACGCTT TCTTGGTCGC CTTTAAGATA CCGAACTTTC TGCGACGCCT GTTTGCTGAA
GGCGCATTTA GTCAGGCCTT TGTACCTGTT TTATCTGAAT ATAAAGAAAA ATATAGTCTA
CGAGAAGTAC AGATATTAGT CAGTCGCACG TCAGGCGCGC TGATGTTAAT TTTATCGATG
CTGACCGTAG TGGTTATTTT AATGGCACCG TGGGTCGTGA CTTTATTTGC GCCCGGTTTT
GCTGATCAAC CTGATAAGTT TGCGATTACC GCTGAGCTGT TGCGCCTAAC CTTCCCTTAC
TTATTATTTA TCTCCATGAC CGCTTTTGCC AGTGGCATTT TACAAAGTTA CGGACGTTTT
GCGGCACCAG CCTTTGCACC TGTATTACTC AATCTGTGTA TGATTGGTGG CGCGCTGGTT
TTTGCACCTA TGTTTGAGAC GCCCATTATG GCGCTCGGTT ATGCGGTCGC TATCGCCGGT
TTATTACAGC TCCTACTGCA ATTGCCGCAG TTATCCCAGC AAAAACTACT GGTGATGCCC
AAAATCGACT TCCAGCATGA AGGCGTCAGA CGCATATTAA AGCTGATGCT ACCTGCTATC
TTTGGGGTAT CGGTTACTCA AATTAATCTG CTATTAAATA CTATCTTTGC CTCTTTGATG
ATTGGCGGCT CAGTCTCGTG GCTATATGCC GCTGAGCGTA TGAGCGAGTT ACCCCTTGGT
TTAATTGGTG TGGCAATTGG TACAGTCATT TTACCAAGCC TATCAAAAAG TGAAGCCCAA
AAAGACGATG TCAGTTTTAA AAAGACCATC GATTGGGCAG CTCGCTTAAT TATCTTAGTC
GGTGTACCTG CATCGGCAGC ACTGTTTATT CTGTCTGACG TGCTCATGCA AGCGCTATTT
TTACGTGGCG AATTTACGTT ACGTGATGCG CAAATGAGTT CGCTTGCGCT AAAAAGCATG
GCGGGTGGCA TCTTAGGCTT TATGTTGATT AAAGTCTTTG CCCCTGCGTT TTTTGCTCGT
CAAGATATCC GTACGCCCGT CAGAATCGGT ATTATTTCCG TTTTTGCTAA TATGATCTTT
AGTGTTATCT TCATTGGGAT ATTTTACTTC CTTGAGATTC CATTGCATGG CGGTCTGGCA
CTTGCGACGA CTGGCGCATC ATTTGTGAAT GCAGGCTTAC TGTATTACTT CTTGCATAAG
CGTGATATTT TCCGTTTTGG TAGTCACTGG AAAAAACTGT TTGCGCAGTT TGCAATCTCT
ACCAGTGCCA TGATCGCCGT GCTTTATGTC ATGCTACCGT ACTTTCCAAC CGATAAGGCA
CAGTGGCAAC GTTTGGTTGC GCTGCTGATT ATGTGTGTGG TCGGTGCGCT GGTTTACGGC
GGAGTATTAT TAGCAACAGG CTTCCGTCCT CGCCAACTCA AACATGGTTA A
|
|---|
| Protein sequence | MAKSRLFRST MVVSSMTMLS RILGLVRDIV LLGVFGAGGL MDAFLVAFKI PNFLRRLFAE
GAFSQAFVPV LSEYKEKYSL REVQILVSRT SGALMLILSM LTVVVILMAP WVVTLFAPGF
ADQPDKFAIT AELLRLTFPY LLFISMTAFA SGILQSYGRF AAPAFAPVLL NLCMIGGALV
FAPMFETPIM ALGYAVAIAG LLQLLLQLPQ LSQQKLLVMP KIDFQHEGVR RILKLMLPAI
FGVSVTQINL LLNTIFASLM IGGSVSWLYA AERMSELPLG LIGVAIGTVI LPSLSKSEAQ
KDDVSFKKTI DWAARLIILV GVPASAALFI LSDVLMQALF LRGEFTLRDA QMSSLALKSM
AGGILGFMLI KVFAPAFFAR QDIRTPVRIG IISVFANMIF SVIFIGIFYF LEIPLHGGLA
LATTGASFVN AGLLYYFLHK RDIFRFGSHW KKLFAQFAIS TSAMIAVLYV MLPYFPTDKA
QWQRLVALLI MCVVGALVYG GVLLATGFRP RQLKHG
|
|---|
| |