| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2026 |
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| Symbol | lpxC |
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| ID | 4035399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 2489536 |
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| End bp | 2490498 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637974498 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_581287 |
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| Protein GI | 93006850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000414833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.794649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACACT ATGGCAATTG TAACAAAATA TGTGAGAAGA CAGTCATGAA TCAACGAACC
ATAAAAACAG CAATTGCTGT TACAGGTACT GGTCTTCATA GTGGTCAACC TGTTGATTTA
GAATTTCATC CGCAACCAAT CGATACTGGA ATCGTCTTTG AGCGTTCTGA TATTACTGGC
AGCACGCCAA TTCCTGCCAG TGCCTTTTTG GTACAAGATA CCATGATGTC ATCTAATCTG
GTGTTTGGTG GTACACGTGT CGGTACGGTT GAGCACTTGC TCAGCGCGAT AGCGGGACTT
GGCGTTGATA ATCTATTAAT TCGTGTATCG GCATCAGAGA TACCTATTAT GGATGGCAGT
GCTGCGCCTT TTGTAGGACT GTTATTGCAA GCAGGTTTTT GCGAACAGGA TGCTTCAAAG
AAATTTATCA GGATTGTACG TACGGTACGT GTCAAAGTTG ACGATAAATG GGCAGAGCTA
CGTCCTTATA ATGGATTTGA GCTTAATTTC GAGATTGATT TTGATCATCC TGCGATTGAT
AAAAACTTTC AGCATGCCCA ATTACAGTTT TCAACCCAAA ACTTCATTGA ACGGCTGAGT
TCAGCACGCA CTTTTGGTTT TTTACGTGAT ATCGAAGCCA TGCGTCAGAA CAATCTGGCA
TTAGGCGGTA GCATGGACAA TGCGATTGTT ATCGATGAAA GTAATATTTT GAATGAAGAA
GGTCTGCGTT TTAATGACGA ATTTGTTCGT CATAAAATTT TAGATGCACT TGGTGATTTA
TATCTGATTG GATATCCTAT TCTGGGTCGT TTTAATGCTT ATAAATCCGG TCATGCTTTA
AATAACTTAT TGGTACGTGA GATTTTATCT GACCATAATA ACTTTGAAAT TGTAACTTTT
GATGACAATG TAACATGTCC TATCGAATAT TTACCTTTAA ATGGTATAAC TGTCGAAGGA
TGA
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| Protein sequence | MIHYGNCNKI CEKTVMNQRT IKTAIAVTGT GLHSGQPVDL EFHPQPIDTG IVFERSDITG
STPIPASAFL VQDTMMSSNL VFGGTRVGTV EHLLSAIAGL GVDNLLIRVS ASEIPIMDGS
AAPFVGLLLQ AGFCEQDASK KFIRIVRTVR VKVDDKWAEL RPYNGFELNF EIDFDHPAID
KNFQHAQLQF STQNFIERLS SARTFGFLRD IEAMRQNNLA LGGSMDNAIV IDESNILNEE
GLRFNDEFVR HKILDALGDL YLIGYPILGR FNAYKSGHAL NNLLVREILS DHNNFEIVTF
DDNVTCPIEY LPLNGITVEG
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