Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1977 |
Symbol | |
ID | 4035074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 2436644 |
End bp | 2438737 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637974449 |
Product | hypothetical protein |
Protein accession | YP_581238 |
Protein GI | 93006801 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC CAGCTTCTAT GGCTATGAAT ACAACCAAAA GCACGACACC GGCACATGTT ATCTCTCCAG CCAACATTGA GTGGCAAACT GATGACGCTG GTAATGAAGT GCCAGTATCA GGTGAGTTTG GCGATGCCTA TTTTTCGCAA GCAGATGGTT TAGCAGAATC TCACCATGTA TTTTTGGCAC ATAATCAGCT GCCCACGCGA TTGGCAAACC TTATTCCTAA GCAATGCTTT ACGATCTACG AACTAGGTTT TGGTACAGGA CTTAATTTAC TCGCGACTTG GCAGTTGTGG CGACAGCTTC GATTAACACA TCCGCACTTA GCAAGCGCCC GTTTGCACTT TATTACTACC GAAAAACACC CCGTCCCCTT TAGTGACTTA GCAAAGATAC TTGCCCCACT GGGACAACGT ACACCTGAAC TGGCACTGTT GATTGAGCAA CTTTTAACCA GTTATCCTCC TCTTATCGCT GGTTGTCATC GGCTAGATTT TATTGATGAT AATTTAACCC TTGATATTTG GCTAGGTGAT GCTAATGATA GCTTAGCAAG TTTAGATAGT ACAGTAGCTA CTCAGCGTCC GTACATCAAT GCCTGGTTTC TAGATGGGTT TGCGCCTTCT TGCAATGAGA TCTTATGGAC AGAGCGTATC TTTAGCCACA TGCAACGCCT ATCACGTGCT GGCACGACTG CTGCTACCTA TAGCTGTGCA GGTATCATCA AACGTGGATT ACAGTCGCAG GGTTTTGTCA TTAAAAAGAG CAAAGTGCTT GGGTCTAAGC GTGAGATGCT CACGGCCGTT ATGAGCGAGA TGTCATCTTT AGATAAGCCT ATTTCAACCT TATCTAATAA GGTGACTTTG TCCAACTATC CTAATAATGC AGTCGTTATC GGTGCTGGTG TGGCAGGACT ACTGACTGCA TGGTCACTTG CCAATCGTGG TATAAGCGTG ACAGTGCTCG ATAAAGACGC ACCGCTGGCT GGTGCATCCG GTAATCCGCG TGCCCTACTC GCCCCGAATA TGACGCCTAT TCATCATGTT TATGAGCATC TGCATTCTAT TGGTTATTTA TACAGTGGTC GATTATATCG ATACTTTAAT CAGCAAGCTG CTATCCAAAA ATCGCCGCTG ATACTTGAGC AGACCGGCAC ATTAGACTTA TTGGTAAAAA CTAATATTGG TACGGAGCAG ATTTTAGATT ATCCAGATAC TATGGCAACC ACTATTAGCC CCGAAAAAGC ACAGGATATC AGTGGTTTAA AAGATAAAGA CTTAGCTCAT AATTTGTATA TGCCGCAGGC TGGTTTGGTC AATCCACAAG CCTTACAAAC TGTTATTCTT GCGCACCCCA ATATCACCTA TCAGCAGCTC AATATTATTA ATATTAAGGA AACCGAGAAC AGTATCATTT TGACAGGTTC TAAAGAGGAT GAAAATGCGA GCCAAGCCTC TTTGACTATC ACAGCTGACC ATGTTGTGAT TTGCGCGGCT TATGAAAGCC ATCAATTGGA TAAACGTATC GTTAAGTGCC GGACGATTCG CGGGCAACTG TCTTGGTTTA CACCAACTGC GCAGCAACTG ACTCAATTGC CTAAATTGCC GCTCAAATAC AGTGGCTACT GTGCGCCATT TATTGGACAG AGCGGTGATG CGGAACTGAA CCATATTAGC GAAAATCAGC CACAGTTTTT ACTTGGTGCA AGCTTTATCG ATGGCGATAC CAATATCGAT GTCCGAGATG AAGAAAATCA GCAAAATTAT GACAAGTTGA TTGAAGATAT GCCTGAATTA AGCAGCGTCT TGCCAAATGA TATCAGTACA TGGCATGCGC GTGCTGGCAT TCGTACTCAA ACGATGGATT ATCATCCTTT GGTCGGATTA CTTGCACAGA GTCAGCGTTT ATGGAGCATG TCAGCAATGG GTGCAAAAGG TTATGCGATT GCACCTATAT GTGCCGAAGC CTTAGCAGAT ATGATGTTAG GCTGTTTTAC ACCTTTATCT GCCGCTATGT TGGCGCGCCT ATCGCCCAAT CGGGCGCGGC TACATAAAGT ACATAAGCAT AAAACACGTC AAGCAGTAAT TTAG
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Protein sequence | MPKPASMAMN TTKSTTPAHV ISPANIEWQT DDAGNEVPVS GEFGDAYFSQ ADGLAESHHV FLAHNQLPTR LANLIPKQCF TIYELGFGTG LNLLATWQLW RQLRLTHPHL ASARLHFITT EKHPVPFSDL AKILAPLGQR TPELALLIEQ LLTSYPPLIA GCHRLDFIDD NLTLDIWLGD ANDSLASLDS TVATQRPYIN AWFLDGFAPS CNEILWTERI FSHMQRLSRA GTTAATYSCA GIIKRGLQSQ GFVIKKSKVL GSKREMLTAV MSEMSSLDKP ISTLSNKVTL SNYPNNAVVI GAGVAGLLTA WSLANRGISV TVLDKDAPLA GASGNPRALL APNMTPIHHV YEHLHSIGYL YSGRLYRYFN QQAAIQKSPL ILEQTGTLDL LVKTNIGTEQ ILDYPDTMAT TISPEKAQDI SGLKDKDLAH NLYMPQAGLV NPQALQTVIL AHPNITYQQL NIINIKETEN SIILTGSKED ENASQASLTI TADHVVICAA YESHQLDKRI VKCRTIRGQL SWFTPTAQQL TQLPKLPLKY SGYCAPFIGQ SGDAELNHIS ENQPQFLLGA SFIDGDTNID VRDEENQQNY DKLIEDMPEL SSVLPNDIST WHARAGIRTQ TMDYHPLVGL LAQSQRLWSM SAMGAKGYAI APICAEALAD MMLGCFTPLS AAMLARLSPN RARLHKVHKH KTRQAVI
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