| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1970 |
|---|
| Symbol | |
|---|
| ID | 4035067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2429255 |
|---|
| End bp | 2430895 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637974442 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_581231 |
|---|
| Protein GI | 93006794 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG CAGCTACTAT AAATACAGTC ACTATAAACA AAGCCGACAT TATCAGCGGC
GGTATGAAAT CGTACAAGCA AGATGATGAT GGTATCATTT TAATTACCCG TGACGACAGC
ACGTTTCGTG CTTTTGATGG CAAATGTCCG CATGCTGGAG CAGATTTGGG TACAGGTTTG
CGTTGTGGTA ATCGCGTTAT TTGTCCTTGG CATCATGCAG CTTTTGATAG CAGCGACGGC
GCATTACTGG AGCCAATCGC GACAACAGGC TTGACTCAAT ATCAAATCAT AGATAATGGC
GACAGCCTAA CGGTTGATAC CTCAGCCAAG ATAGATAAGC AGGTTGAAAA TGATAAGCTG
ACTGATACTC ATACTATTAT CGTTGGCGGC GGTGGAGCAG GGTTTATGAC TGCCCATCAG
CTGCGCAATA CTGGCTACGG CGGCAAGATT ACCTTGGTGA GTGCCGAGGA CAAAGCCCCT
TATAATCGTC CTTTATTATC CAAGGCTTTT TTGGCCGGTA ATATGCCAGA AGAAAAGCTA
TTACTGGGCG GTACAGATTG GGCAAGCAAA CACGATATTG AACTGCGCTT AAACCAAACG
GTCAGTGAAG TGTTGCTCAA TGAGCGTAGT ATCGTGATAA CAGATGAAAA GGGTGATAGC
AACAAGCTAA CAGCGGAATT TTTAGTTGTG GCAACCGGTG CTGAGCCCAA GATTCCACCT
ATTAAAGGGG CAACTCTTGA TGGTGTCTAT ACCTTGCGTA GTATGGATGA TGCCAAATTA
ATCAAAGCCG CCAGTCATGA TCAGCGCGTA GTCATCGTCG GTACGGGCTT TATCGGTATG
GAAGTTGCGT CAGCATTGGC GCAATCGGGT ACTACTGCTT CTATCACTGT TATCGGTCAA
GACCATCGCG TGATGGGCAA TATCGTCTCA GAAACGGTCA GTAATGCGTT GATTACATTG
CATAAAGAAA ATGGTGTTGA GTTCGTGTTT GATGCCAGCG TCGCTGAAAT CATTGCAGCT
GAAAATACTA CTGATAATGG CGAAGAGAAT TTCTCACAAG TGTCTGGCGT CAAATTAGCC
AATGGTGAGC AAATCGATGC TGATATCGTC ATTTTAGGAA CAGGTGTCGC ACCGCGTATC
GAGTTATTAC AGGATACAAA TCATCCAGAT GGCGTAAAAG TCGATGAGCA TTTACAACTG
CGCGATGGTG TCTATGCGTT GGGGGATATT GCCAAAGCGC CCAATCAACT GGGGCGTATG
CGTATTGAGC ACTGGCGGGT TGCATTGCAA CATGGCATGG TGACGGCTGC TGCTATCTTA
AATGACGATA ACGTCAAATC GCTTCAGGAG CGCATTCCTT TCTTTTGGAC GATGCAATAT
GGCAAAAGTT TGCGTTATAG TGGACATGCG GCGACGCCAG ATCATGGCAT TCTAATGGGT
TCGCCAGATA GTTTTAACTA TATAGAATAC TACTTCGATA ACGAGGGTGA AAACACGTGT
GCCAGTGCAT CAAGCTCGCT TGGACGTGAT AAAGAGCTGG TGGCATTCTC TGAGTTATTA
CGCCAAGGTC ATGCGCCAAC ACGGGCACAG ATTAACGCAG GGTTTGATAT CATCGAGCAA
GCGCAGGCGT TATCGCGCTA G
|
|---|
| Protein sequence | MSKAATINTV TINKADIISG GMKSYKQDDD GIILITRDDS TFRAFDGKCP HAGADLGTGL
RCGNRVICPW HHAAFDSSDG ALLEPIATTG LTQYQIIDNG DSLTVDTSAK IDKQVENDKL
TDTHTIIVGG GGAGFMTAHQ LRNTGYGGKI TLVSAEDKAP YNRPLLSKAF LAGNMPEEKL
LLGGTDWASK HDIELRLNQT VSEVLLNERS IVITDEKGDS NKLTAEFLVV ATGAEPKIPP
IKGATLDGVY TLRSMDDAKL IKAASHDQRV VIVGTGFIGM EVASALAQSG TTASITVIGQ
DHRVMGNIVS ETVSNALITL HKENGVEFVF DASVAEIIAA ENTTDNGEEN FSQVSGVKLA
NGEQIDADIV ILGTGVAPRI ELLQDTNHPD GVKVDEHLQL RDGVYALGDI AKAPNQLGRM
RIEHWRVALQ HGMVTAAAIL NDDNVKSLQE RIPFFWTMQY GKSLRYSGHA ATPDHGILMG
SPDSFNYIEY YFDNEGENTC ASASSSLGRD KELVAFSELL RQGHAPTRAQ INAGFDIIEQ
AQALSR
|
|---|
| |