Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1958 |
Symbol | |
ID | 4035158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2416686 |
End bp | 2417345 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637974430 |
Product | single-strand binding protein |
Protein accession | YP_581219 |
Protein GI | 93006782 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000182579 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGGTG TTAATAAAGT TATCATCATC GGTAACCTCG GTGCAGACCC TGAGGCACGT CAATTCAATA ACGGCGGTAG CGTGACCAAT ATTTCGGTTG CGACATCAGA GCAGTGGACA GACAAGCAAA GCGGTGAGAA AAGAGAAGCA ACGGAATGGC ATCGCATTTC GTTGTTCAAT CGCTTGGGCG AAATCGCTGC GCAGTATCTT CGTAAAGGCA GTAAGGTATA TATCGAAGGC AGCTTACGTA CCCGTAAATA TCAAGATCCC AACGGACAAG ACCGTTATAT CACTGAAATT CGTGCTGAAC AAATGCAAAT GCTAGATGGC TCGACAGGTG GTAGTAATGA TGCTGGTGGT GGCTTTGGTA GCAATAACCA AGGTGGTCAA AGCAACCAAG GTGGCTATGG TAATCAGGGC GGCGGATTTA GTAACCAAGG TGGCCAGAAC GACTATGGTC AGCAAGGAGG CAATCAGCCC GCTCAACAAG GCGGTTATAA TCAAGGCGGC AGTGCGTCAC AGGGTGGTCA TCAAAATAGC TTTAATAATC AGAATGCGCC CGCTCAGCAG AATCAATTTA ATAAACCGAC TCAAGCACCA GCGCAGTCGA AGCCTACAGC AATGCCAGAT GGCCCTGTAG ACGATGACAT TCCGTTCTGA
|
Protein sequence | MRGVNKVIII GNLGADPEAR QFNNGGSVTN ISVATSEQWT DKQSGEKREA TEWHRISLFN RLGEIAAQYL RKGSKVYIEG SLRTRKYQDP NGQDRYITEI RAEQMQMLDG STGGSNDAGG GFGSNNQGGQ SNQGGYGNQG GGFSNQGGQN DYGQQGGNQP AQQGGYNQGG SASQGGHQNS FNNQNAPAQQ NQFNKPTQAP AQSKPTAMPD GPVDDDIPF
|
| |