| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1905 |
|---|
| Symbol | |
|---|
| ID | 4033615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2352970 |
|---|
| End bp | 2353686 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637974377 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_581166 |
|---|
| Protein GI | 93006729 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.339028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.200185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAC TTACTAGGGA GTCTGACATG GACTTTACAA CTTACTGGCA ATATAGCGAT
ATGGTGACTA GAACCTTGTT CTTTTTACTG CTCGCTTTAT CTATCATCTC TTGGGTCACG
GGCATCATTC GGGTGCTACA AAGCCGAAAA TTGGTGACGA CTGTTGCTGA TGATTTGAGC
CAGCAGATGC AGGAAAAACG CTCAGATCTA AGTGTGGCAG ATGCAGCGAC GCGGCGTTTG
ATTACTGAGC AAACCTTGCT AAAGCACATT GGTCGCTACC GTTTTGCTAG CGAGCGTGGT
TTGCCTATCC TTGGTACGAC AGCAGCGATT GCACCGTTTA TTGGTCTGTT TGGGACAGTA
TGGGGTATTT TCCATGCCCT ACGTAATATT GGTATGAGCG GACAAGCAGG ACTTGGGCAG
GTAGCGGGAC CGGTCGGTGA GGCACTTATC ATGACCGGTT TAGGAATAGC CGTAGCGATT
CCAGCGGTAG TGTTCTATAA CCTTGCTGTA CGTATTAATC GTAGCATCAT GTACCAGGCA
AATGATCGCG CCCATGATTT ACTGGCGCAA TCTGCTGAGC TAGCAGTCAC ACAACAATCA
TCAATAAATA ATGAACCTGC CGTGACTCAA GCTCAGTTAG TAAAAGGTAA TCATACAGAG
ACGCAAGCCC CTCAACAAAC AGAACATTAT CATAAATCAG CACCATCACA GCCGTAA
|
|---|
| Protein sequence | MAQLTRESDM DFTTYWQYSD MVTRTLFFLL LALSIISWVT GIIRVLQSRK LVTTVADDLS
QQMQEKRSDL SVADAATRRL ITEQTLLKHI GRYRFASERG LPILGTTAAI APFIGLFGTV
WGIFHALRNI GMSGQAGLGQ VAGPVGEALI MTGLGIAVAI PAVVFYNLAV RINRSIMYQA
NDRAHDLLAQ SAELAVTQQS SINNEPAVTQ AQLVKGNHTE TQAPQQTEHY HKSAPSQP
|
|---|
| |