Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1901 |
Symbol | |
ID | 4033611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2347860 |
End bp | 2350550 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637974373 |
Product | DNA topoisomerase I |
Protein accession | YP_581162 |
Protein GI | 93006725 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.164413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.306298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAC CCGCAGCTAA AAAAAGTGCA GCGCCCGCTG CTGACAAACC TAAAGGCAGC CCAAAAGCCA GTCCAAAGGG CAAGTCTTTG GTGATTGTTG AATCACCCGC CAAGGCAAAA ACCATCAATA AATATTTGGG TGATGATTTT ATCGTGCGCT CAAGTATTGG TCATGTCCGA GATTTGCCAG TCGGTGCTAG CAAAAGCGCA AAGAAACCAG CAACGACCAA AAAAGATGAC AGTCTAAGTA AAGAAGAGAA AACTCAGCAA GCATTGGTAC GGCGTATGGG TGTCGACCCT GAGCATGATT GGGCGGCAGT CTATGAAGTC TTGCCAAATA AGACCAAGGT CATTAAAGAG CTGAAAGCTT TAGCCAAAGA CGCTGACAAA ATCTATCTGG CAACGGATAT GGATAGAGAG GGAGAGGCGA TTGCTTGGCA TCTTAAAGAA GTCATCGGCG GCGCTGACAG TAAGTATGAG CGTGTGGTTT TTAACGAGAT TACCAAATCT GCCATTCAAA ATGCCTTTAA GCAACCGTCT AAACTTGATA TTGACCGAGT TAATGCACAG CAAGCGCGGC GTTTTTTAGA CCGTGTCGTT GGTTTTATGG TATCGCCACT ATTGTGGCAA AAAGTCGCTC GTGGTCTATC GGCGGGTCGC GTACAGTCAG TTGCCATGCG CTTGGTTGTT GAGCGTGAAC ATGAAATTCG CGCCTTTATT CCAGAAGAAT ATTGGCAGAT TCATGCCGAT ACCCATATTG CTGATAGCAA AGCCAAAAAA GCTGCAGACG CTGAGCAAAT TGGTATTCGT TTAGAAGCCA CTAAGCAAGG CGGCAAAACG CTAAAGCTCG TCAATAAAGA GCAGACTGAT AAAGTATTAG ATGTCCTAAA AGCAAATGAC TTTATCGTCA AAGAACGTGA AGAGAAGCCA ACGCAGTCGA AACCAAGCGC GCCTTTTATT ACCTCGACTT TGCAACAAGC CGCCAGCACG CGTCTGGGAT TCTCAGTTAA GAAAACCATG ATTTTAGCGC AACGTTTATA TGAAGCGGGT CATATTACTT ATATGCGTAC CGATTCGACC TTTTTATCAG GTGATGCGCT TGCTGCGGTA CGTGGCTATA TCGAAGACAG CTATGGCGCA AAATACGTGC CAGAAAAGCC GAATTTCTAT GGTAATAAAC AAGGCGCACA AGAAGCGCAT GAAGCCATAC GTCCGTCTAA CGTCAATATG AAGTCAACGC AGTTGAAAGC CGTTGAGCGT GATGCGATAC GTTTGTATGA GCTAATCTGG CGTCAGTTTG TAGCCTGTCA GATGCTACCA GCAAAATATC TATCAGTGAA TTTATTCGTT GCTGCTGATG ATGTCGAGCT AAAAGCGCGT GGTCGCACCT TGGTATTTGA TGGCTTTACC AAGGTTATGC CACCTGCCAA GACCGACGAT AACTTATTAC CAGATGTGAA AAAAGGCGAT AAATTAATAC TAGATAAGCT TGATCCGAGT CAGCATTTTA CTAAGCCACC ACCGCGTTTT ACTGAGGCAA GTTTGGTCAA AGAGCTTGAG AAAAAAGGCA TCGGTCGTCC ATCGACCTAT GCTTCTATCA TCTCGACTAT TCAAGATCGC GGTTATGTGA AGTTAGAAAA CAAGCGCCTG TTTGCTGAAA AAATGGGTGA TATCGTCACC GATAGACTGA CGGCAAGTTT TCCTGATTTG ATGGATTATA CCTTTACCGC CGCGCTTGAA GACAAGCTTG ATCATGTGGC AGAAGGCGAT ACCGATTGGA AAGATGTCCT TGATAATTTC TATGGTGACT TCAAAACAAC GCTTGATCGT GCTAAAGAAA AAGACGGCAT GCGCCCGAAT GATCCAACCG ATGTACCAGA TGTCCATTGC GATCTTTGTG CTCGTCCAAT GCAGCTACGT ACCGGTTCAA CGGGTGTATT CTTAGGTTGT ACTGGTTACA ACTTACCACC AAAAGAACGC TGTAAAGGCA CTAAGAACTT AATGCCAGTC GAAGCTTTTG CCAATCTTGA TGATGCCGAA GGTGATGACG AAGCGGCCGA AGTCAGAGAT TTGATGGAGA AGAAACGCTG CCCGAAATGC GGTACGGCAA TGAATGGTTA TATCGTTGAT GGCGGTCTTA AGCTGCATGT GTGTGGTAAC AATCCTGATT GTGATGGTTA TGTCTTAGAA GAAGGTAAGT TCGAAGTTCC TGGTTCTGAT TCTCCAACCA TTGATTGTAA TAAGTGCGAT GGACAAATGG AGTTAAAGAC AGGACGTTTT GGTCCTTACT TTGCGTGTCA GCAATGTGAT AACACGCGTA AAGTGCTGAA AACAGGCGAA GCAGCACCGC CGCGCATGGA TCCTATTCAT CTACCAGAGC TAAAATCAGT TAAGCATGAA GATTACTTTA TCTTACGTGA AGGTGCAGCG GGCATGTTCT TAGCAGCCTC TAAGTTCCCT AAAGTACGGG AGACACGTCC GCCAAAGCTT GCTGAGCTGC GAGAGATTAA AGATAAAATG GAAGACAAGT TCCAGTATTT GTTTGAAGGT CCAGATGAGG ATCCAGATGG TAATCCGACG ATTTTACGTT GGTCGCGCAA GAAAAAAGAG CAGTATATCG GCTCTGAGAA AAATGGCAAA GCCACACGTT GGGGCGTTTA CTGGCGTAAA GGAGAGTGGG TAGAGGAGTA A
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Protein sequence | MTKPAAKKSA APAADKPKGS PKASPKGKSL VIVESPAKAK TINKYLGDDF IVRSSIGHVR DLPVGASKSA KKPATTKKDD SLSKEEKTQQ ALVRRMGVDP EHDWAAVYEV LPNKTKVIKE LKALAKDADK IYLATDMDRE GEAIAWHLKE VIGGADSKYE RVVFNEITKS AIQNAFKQPS KLDIDRVNAQ QARRFLDRVV GFMVSPLLWQ KVARGLSAGR VQSVAMRLVV EREHEIRAFI PEEYWQIHAD THIADSKAKK AADAEQIGIR LEATKQGGKT LKLVNKEQTD KVLDVLKAND FIVKEREEKP TQSKPSAPFI TSTLQQAAST RLGFSVKKTM ILAQRLYEAG HITYMRTDST FLSGDALAAV RGYIEDSYGA KYVPEKPNFY GNKQGAQEAH EAIRPSNVNM KSTQLKAVER DAIRLYELIW RQFVACQMLP AKYLSVNLFV AADDVELKAR GRTLVFDGFT KVMPPAKTDD NLLPDVKKGD KLILDKLDPS QHFTKPPPRF TEASLVKELE KKGIGRPSTY ASIISTIQDR GYVKLENKRL FAEKMGDIVT DRLTASFPDL MDYTFTAALE DKLDHVAEGD TDWKDVLDNF YGDFKTTLDR AKEKDGMRPN DPTDVPDVHC DLCARPMQLR TGSTGVFLGC TGYNLPPKER CKGTKNLMPV EAFANLDDAE GDDEAAEVRD LMEKKRCPKC GTAMNGYIVD GGLKLHVCGN NPDCDGYVLE EGKFEVPGSD SPTIDCNKCD GQMELKTGRF GPYFACQQCD NTRKVLKTGE AAPPRMDPIH LPELKSVKHE DYFILREGAA GMFLAASKFP KVRETRPPKL AELREIKDKM EDKFQYLFEG PDEDPDGNPT ILRWSRKKKE QYIGSEKNGK ATRWGVYWRK GEWVEE
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