Gene Pcryo_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1901 
Symbol 
ID4033611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2347860 
End bp2350550 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content45% 
IMG OID637974373 
ProductDNA topoisomerase I 
Protein accessionYP_581162 
Protein GI93006725 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.306298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC CCGCAGCTAA AAAAAGTGCA GCGCCCGCTG CTGACAAACC TAAAGGCAGC 
CCAAAAGCCA GTCCAAAGGG CAAGTCTTTG GTGATTGTTG AATCACCCGC CAAGGCAAAA
ACCATCAATA AATATTTGGG TGATGATTTT ATCGTGCGCT CAAGTATTGG TCATGTCCGA
GATTTGCCAG TCGGTGCTAG CAAAAGCGCA AAGAAACCAG CAACGACCAA AAAAGATGAC
AGTCTAAGTA AAGAAGAGAA AACTCAGCAA GCATTGGTAC GGCGTATGGG TGTCGACCCT
GAGCATGATT GGGCGGCAGT CTATGAAGTC TTGCCAAATA AGACCAAGGT CATTAAAGAG
CTGAAAGCTT TAGCCAAAGA CGCTGACAAA ATCTATCTGG CAACGGATAT GGATAGAGAG
GGAGAGGCGA TTGCTTGGCA TCTTAAAGAA GTCATCGGCG GCGCTGACAG TAAGTATGAG
CGTGTGGTTT TTAACGAGAT TACCAAATCT GCCATTCAAA ATGCCTTTAA GCAACCGTCT
AAACTTGATA TTGACCGAGT TAATGCACAG CAAGCGCGGC GTTTTTTAGA CCGTGTCGTT
GGTTTTATGG TATCGCCACT ATTGTGGCAA AAAGTCGCTC GTGGTCTATC GGCGGGTCGC
GTACAGTCAG TTGCCATGCG CTTGGTTGTT GAGCGTGAAC ATGAAATTCG CGCCTTTATT
CCAGAAGAAT ATTGGCAGAT TCATGCCGAT ACCCATATTG CTGATAGCAA AGCCAAAAAA
GCTGCAGACG CTGAGCAAAT TGGTATTCGT TTAGAAGCCA CTAAGCAAGG CGGCAAAACG
CTAAAGCTCG TCAATAAAGA GCAGACTGAT AAAGTATTAG ATGTCCTAAA AGCAAATGAC
TTTATCGTCA AAGAACGTGA AGAGAAGCCA ACGCAGTCGA AACCAAGCGC GCCTTTTATT
ACCTCGACTT TGCAACAAGC CGCCAGCACG CGTCTGGGAT TCTCAGTTAA GAAAACCATG
ATTTTAGCGC AACGTTTATA TGAAGCGGGT CATATTACTT ATATGCGTAC CGATTCGACC
TTTTTATCAG GTGATGCGCT TGCTGCGGTA CGTGGCTATA TCGAAGACAG CTATGGCGCA
AAATACGTGC CAGAAAAGCC GAATTTCTAT GGTAATAAAC AAGGCGCACA AGAAGCGCAT
GAAGCCATAC GTCCGTCTAA CGTCAATATG AAGTCAACGC AGTTGAAAGC CGTTGAGCGT
GATGCGATAC GTTTGTATGA GCTAATCTGG CGTCAGTTTG TAGCCTGTCA GATGCTACCA
GCAAAATATC TATCAGTGAA TTTATTCGTT GCTGCTGATG ATGTCGAGCT AAAAGCGCGT
GGTCGCACCT TGGTATTTGA TGGCTTTACC AAGGTTATGC CACCTGCCAA GACCGACGAT
AACTTATTAC CAGATGTGAA AAAAGGCGAT AAATTAATAC TAGATAAGCT TGATCCGAGT
CAGCATTTTA CTAAGCCACC ACCGCGTTTT ACTGAGGCAA GTTTGGTCAA AGAGCTTGAG
AAAAAAGGCA TCGGTCGTCC ATCGACCTAT GCTTCTATCA TCTCGACTAT TCAAGATCGC
GGTTATGTGA AGTTAGAAAA CAAGCGCCTG TTTGCTGAAA AAATGGGTGA TATCGTCACC
GATAGACTGA CGGCAAGTTT TCCTGATTTG ATGGATTATA CCTTTACCGC CGCGCTTGAA
GACAAGCTTG ATCATGTGGC AGAAGGCGAT ACCGATTGGA AAGATGTCCT TGATAATTTC
TATGGTGACT TCAAAACAAC GCTTGATCGT GCTAAAGAAA AAGACGGCAT GCGCCCGAAT
GATCCAACCG ATGTACCAGA TGTCCATTGC GATCTTTGTG CTCGTCCAAT GCAGCTACGT
ACCGGTTCAA CGGGTGTATT CTTAGGTTGT ACTGGTTACA ACTTACCACC AAAAGAACGC
TGTAAAGGCA CTAAGAACTT AATGCCAGTC GAAGCTTTTG CCAATCTTGA TGATGCCGAA
GGTGATGACG AAGCGGCCGA AGTCAGAGAT TTGATGGAGA AGAAACGCTG CCCGAAATGC
GGTACGGCAA TGAATGGTTA TATCGTTGAT GGCGGTCTTA AGCTGCATGT GTGTGGTAAC
AATCCTGATT GTGATGGTTA TGTCTTAGAA GAAGGTAAGT TCGAAGTTCC TGGTTCTGAT
TCTCCAACCA TTGATTGTAA TAAGTGCGAT GGACAAATGG AGTTAAAGAC AGGACGTTTT
GGTCCTTACT TTGCGTGTCA GCAATGTGAT AACACGCGTA AAGTGCTGAA AACAGGCGAA
GCAGCACCGC CGCGCATGGA TCCTATTCAT CTACCAGAGC TAAAATCAGT TAAGCATGAA
GATTACTTTA TCTTACGTGA AGGTGCAGCG GGCATGTTCT TAGCAGCCTC TAAGTTCCCT
AAAGTACGGG AGACACGTCC GCCAAAGCTT GCTGAGCTGC GAGAGATTAA AGATAAAATG
GAAGACAAGT TCCAGTATTT GTTTGAAGGT CCAGATGAGG ATCCAGATGG TAATCCGACG
ATTTTACGTT GGTCGCGCAA GAAAAAAGAG CAGTATATCG GCTCTGAGAA AAATGGCAAA
GCCACACGTT GGGGCGTTTA CTGGCGTAAA GGAGAGTGGG TAGAGGAGTA A
 
Protein sequence
MTKPAAKKSA APAADKPKGS PKASPKGKSL VIVESPAKAK TINKYLGDDF IVRSSIGHVR 
DLPVGASKSA KKPATTKKDD SLSKEEKTQQ ALVRRMGVDP EHDWAAVYEV LPNKTKVIKE
LKALAKDADK IYLATDMDRE GEAIAWHLKE VIGGADSKYE RVVFNEITKS AIQNAFKQPS
KLDIDRVNAQ QARRFLDRVV GFMVSPLLWQ KVARGLSAGR VQSVAMRLVV EREHEIRAFI
PEEYWQIHAD THIADSKAKK AADAEQIGIR LEATKQGGKT LKLVNKEQTD KVLDVLKAND
FIVKEREEKP TQSKPSAPFI TSTLQQAAST RLGFSVKKTM ILAQRLYEAG HITYMRTDST
FLSGDALAAV RGYIEDSYGA KYVPEKPNFY GNKQGAQEAH EAIRPSNVNM KSTQLKAVER
DAIRLYELIW RQFVACQMLP AKYLSVNLFV AADDVELKAR GRTLVFDGFT KVMPPAKTDD
NLLPDVKKGD KLILDKLDPS QHFTKPPPRF TEASLVKELE KKGIGRPSTY ASIISTIQDR
GYVKLENKRL FAEKMGDIVT DRLTASFPDL MDYTFTAALE DKLDHVAEGD TDWKDVLDNF
YGDFKTTLDR AKEKDGMRPN DPTDVPDVHC DLCARPMQLR TGSTGVFLGC TGYNLPPKER
CKGTKNLMPV EAFANLDDAE GDDEAAEVRD LMEKKRCPKC GTAMNGYIVD GGLKLHVCGN
NPDCDGYVLE EGKFEVPGSD SPTIDCNKCD GQMELKTGRF GPYFACQQCD NTRKVLKTGE
AAPPRMDPIH LPELKSVKHE DYFILREGAA GMFLAASKFP KVRETRPPKL AELREIKDKM
EDKFQYLFEG PDEDPDGNPT ILRWSRKKKE QYIGSEKNGK ATRWGVYWRK GEWVEE