Gene Pcryo_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1898 
Symbol 
ID4033608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2342621 
End bp2343982 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content45% 
IMG OID637974370 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_581159 
Protein GI93006722 
COG category[R] General function prediction only 
COG ID[COG2056] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0935892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA ATGCGGTACT ACTGGCAGTT GTCATCATGC TAGGGTTGTC ACTAGCGCGA 
GTGCACGTCG TGCTCAGTTT GTTAATCGGT GCGCTGGCAG GTGGACTCAT CGCTGGTCTC
GGTATGACTG ATACCTTGAA CGCCTTTCAA GAAGGGATTA AAAACGGCGC ACAAATCGCG
CTGTCTTATG CGCTGTTAGG TGCGTTTGCA GTAGCAATTG CGCATTCCGG CTTGCCACAA
TCTTTGGCAG GGGCAGTGAT TAAGCGCATT GATGCAGGCG GCACCAGTGG CATGATTAAA
TACATGCTGT TTGCAGGTCT TGTCACTATG AGCTGCTTTA GTCAAAACTT AATCCCCATT
CATATTGCCT TTATTCCCTT GCTTGTGCCG CCATTATTAT TGGCATTTAA CCGCATGCAT
ATTGATAGAC GCCTGATTGC TTGTTTGATT ACCTTTGGAC TTGTCACGAC TTATATGTTT
ATTCCTTATG GGTTTGGCGA TATTTATCTC AATCAAATCA TGCTCAAAAA TGTTGGTGAA
GCGGGTATCG ATATCAGTAA TATCTCGGTG ACCAAAGCCA TGGCGATTCC CGCTTTGGGT
ATGTTCGTGG GCTTACTGAT TGCTGTATTT ATCAGCTATC GTAAACCGCG TCAGTATCAG
CAGCTAGCAA TTGATAAAGC TGCACATGAT GAAGTGTTAG AAGGTGACGA GTTAAGCAAA
ACCGCGGCTA CTGCAAAAAC ACAAAGTAAA ATGAAGACGC TAGTGGCGAT TGCAGCGATT
GTCACTGCTT TTGTGGTGCA GCTATATACT GATTCACTAT TACTAGGATC TATGTTTGGT
TTTGGCGTCT TTATGGCGAC AGGCGTCGTC AAATGGCGTG ATGCCGATAC GGTCTTTAAT
GACGGTATCA AGCTGATGGC AATGATTGGC TTTATTATGA TTACGGCACA AGGGTTTGCG
GAAGTCATGA AAGCGACTGA GCAAATACAG CCATTGGTCG ATGGAGCGGC ATCGTTGTTT
GCTGGTAACA AAGCGATGGC AGCATTTATT ATGTTACTCA TTGGCTTGAT TGTAACTATG
GGTATTGGCT CATCCTTTTC GACCATTCCA ATTTTGGCAG CGATTTATGT CCCACTTTGT
ATTTCGCTTG GGTTTTCGCC ATTGGCAACA GTAGCTATTA TTGGAACGGC TGGTGCGCTT
GGTGATGCCG GTTCTCCAGC GTCAGATTCA ACATTGGGTC CCACCTCTGG TCTAAATGTT
GATGGACAAC ATGACCATAT CAAAGACAGC GTGGTGCCAA CCTTTATCCA TTACAATATT
CCGTTATTGA TCTTTGGTTG GATTGCAGCG ATGGTATTGT AG
 
Protein sequence
MTINAVLLAV VIMLGLSLAR VHVVLSLLIG ALAGGLIAGL GMTDTLNAFQ EGIKNGAQIA 
LSYALLGAFA VAIAHSGLPQ SLAGAVIKRI DAGGTSGMIK YMLFAGLVTM SCFSQNLIPI
HIAFIPLLVP PLLLAFNRMH IDRRLIACLI TFGLVTTYMF IPYGFGDIYL NQIMLKNVGE
AGIDISNISV TKAMAIPALG MFVGLLIAVF ISYRKPRQYQ QLAIDKAAHD EVLEGDELSK
TAATAKTQSK MKTLVAIAAI VTAFVVQLYT DSLLLGSMFG FGVFMATGVV KWRDADTVFN
DGIKLMAMIG FIMITAQGFA EVMKATEQIQ PLVDGAASLF AGNKAMAAFI MLLIGLIVTM
GIGSSFSTIP ILAAIYVPLC ISLGFSPLAT VAIIGTAGAL GDAGSPASDS TLGPTSGLNV
DGQHDHIKDS VVPTFIHYNI PLLIFGWIAA MVL