| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1890 |
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| Symbol | |
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| ID | 4033600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2335822 |
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| End bp | 2336868 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637974362 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_581151 |
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| Protein GI | 93006714 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.56685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.043367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC AACAATTATT AAAGACAGCG CCTGTTACCA CCTTGTTATT AGTCAGCTTT
ATCGGGCTAT TTATCATGCA GGTATTAACG GGTGTCGATG CCAATAATCC TTCAACTGAA
GCGCTGATAA AATGGGGTGC CAATGCCTTG CCTTTTACTA TGGATAATGA GCCATGGCGC
TTGGTGAGCA GTGCGTTTTT GCATATTGGG CTGATGCATT TATTGTTTAA TGGTTTTGCC
ATGTATTTTT TTGGGCAAAT CGCCGAGCCG ATGTTTGGCT CCGCGAAGTT TTTGGCGCTA
TTTTTACTGG CAGCAATCGG TGGCAACTTA CTGAATAATT ACGTCACATG GCAAGGTATT
GTGGACGGGA CAGGACAAGC CGGATTATCT GCGGGCGCAT CGGGCGGTAT CATGGGTATT
GGCGCAGCGT TATTAATCGC CGCGCTGTTT AAGATATCAG TCAATGGTAT GGTGCTGAAT
CTTAAAAGCC TGATATTTAT TATGGGCATC AACCTAGTCT ATGGTTTTGC GGTGCCGGGT
ATCGACAATG CTGGTCACAT TGGCGGTGCG ATTACCGGTC TTATCATTTC ACTACCTTTT
GCGATTGCCT ATCGTCAACG TATGGCAGCT GTCATACAGA ATATTGCCAC TTACGAGAAT
GATTATTTAC CCCATTATCA AAGTGAGCAA CAAAACGAAT ATCATACCAC TTATATTAAT
ACGCCAGTGA ATAGCGGCAC TGACTTTGAT AATAATGCAC ACTTAAATAA TACTCATTTA
AATAACGCCA GTTTGCATAA TGAGAGTCAT GTAGATAATA ATAGTGGTGT AAACTCAAAC
GTAACTGTTA ACCCTACCAA TCCTATTCGC CCTACTCTTA ACGAAACTCT GAATGAAAAA
AGCACAGCCA TTAAACCTGC GCTTATTTGG CAATTGCTGC CATGGATTGT AATGTTATTT
ATTATCATTG GCTTTATGTG GTGGTGGCAA GATATTCATC AGCAATTAAT AGAAGTGCTC
AATGCCATTG AGCAAAGCAC TGTTTAA
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| Protein sequence | MTIQQLLKTA PVTTLLLVSF IGLFIMQVLT GVDANNPSTE ALIKWGANAL PFTMDNEPWR
LVSSAFLHIG LMHLLFNGFA MYFFGQIAEP MFGSAKFLAL FLLAAIGGNL LNNYVTWQGI
VDGTGQAGLS AGASGGIMGI GAALLIAALF KISVNGMVLN LKSLIFIMGI NLVYGFAVPG
IDNAGHIGGA ITGLIISLPF AIAYRQRMAA VIQNIATYEN DYLPHYQSEQ QNEYHTTYIN
TPVNSGTDFD NNAHLNNTHL NNASLHNESH VDNNSGVNSN VTVNPTNPIR PTLNETLNEK
STAIKPALIW QLLPWIVMLF IIIGFMWWWQ DIHQQLIEVL NAIEQSTV
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