| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1879 |
|---|
| Symbol | |
|---|
| ID | 4034400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2322445 |
|---|
| End bp | 2323026 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637974351 |
|---|
| Product | tRNA--hydroxylase |
|---|
| Protein accession | YP_581140 |
|---|
| Protein GI | 93006703 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.794766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000682871 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGCAC GAACCTCACA AGCTTGGGTC AACGCCGCTG TTAATAACTT ACCACTGATT
ATTCAAGACC ATGCCAATTG TGAAAAAAAG GCCGCCGGTA CCGCGATGAA TCTCATCTTT
CGCTATGAGT TCTCTTATGA TTTACAGCGT AAATTGGCAC AATTGATACG TGAAGAAATG
CTGCACTATG AGCAAGTGCT CGGCATTATG AATGAGCGCG GGCAAGCATG GAAATATCTA
AGTGCTGGAC GCTATGCCAA AGGGATGCTA AAACACAAGC GTACTTATGA ACCCGCTGCA
ATGGTAGATG TGCTGATTAT TGGTGCATTT ATCGAGGCAC GTTCTTGTGA GCGTTTTGCG
GCACTTTCTG AGGTTATCAA TGATGAGCGT TTGGCAAAAT ACTATCGTTA TTTATTAAAA
TCAGAAAGCC GTCATTTTGA AGATTATTTG GCACTAGCGC AGTCATTGTC TGATGACAGT
ATCGATGAGC GTGTGGCATT CTTTAAAGAA GTAGAAGCAG AGCTGATATC AACTCCAGAT
ACTGAGCTGC GCTTTCATAG CGGCGACCCT ATTGCTCTCT AA
|
|---|
| Protein sequence | MGARTSQAWV NAAVNNLPLI IQDHANCEKK AAGTAMNLIF RYEFSYDLQR KLAQLIREEM
LHYEQVLGIM NERGQAWKYL SAGRYAKGML KHKRTYEPAA MVDVLIIGAF IEARSCERFA
ALSEVINDER LAKYYRYLLK SESRHFEDYL ALAQSLSDDS IDERVAFFKE VEAELISTPD
TELRFHSGDP IAL
|
|---|
| |