Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1878 |
Symbol | |
ID | 4034399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2319428 |
End bp | 2321632 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637974350 |
Product | malate synthase G |
Protein accession | YP_581139 |
Protein GI | 93006702 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00162992 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000109363 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGAGCCAGT CTTCTAATGC CAATCGTGTT CAAAAAGGCA TTCTTGCCAT TGATCAGCAG CTGTTCGATT TTATCGAAAA TGAAGTGCTG CCGAAAGTCG GTATTGATTC AGACGGTTAC TGGTCAGGTT TCGAAAAGGT CATCAAAGAG TTTACGCCAC GTAATAAAGC ACTGCTTGCA ACGCGTGCTA AGATTCAAGG ACAGATTGAC CAATGGCACC TGCAACATCC TACCAAAAAT GGCGACATTG ATTATCCAGC GTACAAAGCA TTTTTACAAG AAATTGGCTA CCTATTACCA GAAGGCGAAG CGTTCAGTGT CAGCACAGAA AACGTCGATG ATGAGATTGC CCGTATTGCA GGACCTCAGC TGGTAGTACC AGTACGTAAT GCTCGCTATG CGTTGAACGC CAATAATGCG CGTTGGGGCA GCTTATATGA TGCTTTATAT GGCACCAATG TTATCAGTGA TGAAAATGGT CAAGAAGCAA AAGGTGGCTA CAATCCAACA CGTGGCGCAG CCGTCGTCGC TTATGCCAAA AAATTCCTAG ATGAAAATTT TGCCTTAGCA TCAGGCTCCT ATAGCGATGT AACAGGTTTT AGAGTCGTTG ATGGTAAGCT TGAAATTGCG CAAGGCGATA GCAGCACGCA ACTAAAAGAT GCCGCACAGT TTGCAGGTTT CGTAGGCGAC GCTGATAGTC CTAGCGCTGT GTTATTAAAG AACAATAACT TGCATGCTGA GATTCAAGTT GATGGCAATC ATCCCATTGG CAAAGATGAT CCTGCACATA TCAAAGACGT GTTATTAGAG TCGGCGCTGA CTGCGATACA AGATTGTGAA GACTCCATCG CTGCTGTTGA TGCAGAAGAG AAGGTTGAAG CGTATCGCAA TTGGTTTGGC TTGATGAATG GCGATTTGCA AGAAACCTTT GAGAAAGGCG GCAAGACCCG TACGCGTAAA CAGAATCCTG ATCGCGAATA TACTACGCCA GAGGGTGATA CGCTGACCTT GCCAGGTCGC TCACTTTTAT TGCTACGTAA CGTCGGACAT CTCATGCAAA ATCCATCGAT TTTGGTAGAT TTAGGCAATG GTCAAGAAGA GGTTTTCGAA GGTTTAATGG ATGGTTTGAT TACGCCTTTA TTATCATTGA ATGATTTAAA AGGTAAAACC GAGCTATCAA ACTCACGTAA AGGTTCAATG TATATTGTTA AACCAAAAAT GCATGGTCCT GATGAGGTGA AGATGGCGAA TGACTTATTT AACGCCTCAG AAGACCTACT GGGCTTAGAG CGTTATACGA TAAAGATCGG CATTATGGAT GAAGAACGCC GTATGACGGT CAACTTAAAA GAAGCCATTC GCCAAGCAAA AGAGCGTGTT ATTTTCATCA ATACCGGCTT CTTAGATCGC ACAGGTGATG AGATGCACAC CAGTATGAAT GCAGGTCCAT TTGTCCGCAA AGGCGATATG AAGTCGCAAA CGTGGCTGCC TGCTTATGAG CAATGGAACG TCGATATCGG TCTTGAAGTA GGCTTACAAG GTCACGCGCA GATTGGTAAA GGCATGTGGG CAAAACCTGA TGAAATGCAA GAGATGATGG ACACCAAAAT TGCCCATCCA CAGGCAGGTG CTAATACGGC GTGGGTGCCA TCTCCAACGG GTGCTACCTT ACACAGCATG CACTATCATA AAGTCAATGT TGCTGAGGTT CAAGACAGCC TGAAATCACG TGCGCGCGCT AGCGTAGATG ATATCTTAAC CATTCCATTG GCAAAAAACA CCAATTGGAC TGAAGAAGAA AAACAGCAAG AGATTGATAA TAATGCTCAA GGTATCCTAG GCTATGTCGT ACGTTGGGTA AACCAAGGCG TTGGTTGCTC TAAAGTACCT GACATCAATG ACGTCGGCTT GATGGAAGAT CGTGCGACAT TGCGTATCTC AAGTCAGCAT ATTGCCAATT GGTTACACCA TAATGTTGTC AGCGAGCAGC AAGTGATGGA CGCTATGAAA CGTATGGCTA AAATCGTCGA TGAGCAAAAC GCTGGTGATG CTGATTATCA ACCAATGGCG ACTGACTTGG ACAACTCCTA TGCTTTCAAA GCCGCTTGTG ATTTGGTATT TAAAGGTCGC GAGCAGCCAA GTGGTTATAC TGAGCCATTA TTGCATCAAG CACGTCTAGA TCTAAAAGCC AGTGTTGGCT GCTAA
|
Protein sequence | MSQSSNANRV QKGILAIDQQ LFDFIENEVL PKVGIDSDGY WSGFEKVIKE FTPRNKALLA TRAKIQGQID QWHLQHPTKN GDIDYPAYKA FLQEIGYLLP EGEAFSVSTE NVDDEIARIA GPQLVVPVRN ARYALNANNA RWGSLYDALY GTNVISDENG QEAKGGYNPT RGAAVVAYAK KFLDENFALA SGSYSDVTGF RVVDGKLEIA QGDSSTQLKD AAQFAGFVGD ADSPSAVLLK NNNLHAEIQV DGNHPIGKDD PAHIKDVLLE SALTAIQDCE DSIAAVDAEE KVEAYRNWFG LMNGDLQETF EKGGKTRTRK QNPDREYTTP EGDTLTLPGR SLLLLRNVGH LMQNPSILVD LGNGQEEVFE GLMDGLITPL LSLNDLKGKT ELSNSRKGSM YIVKPKMHGP DEVKMANDLF NASEDLLGLE RYTIKIGIMD EERRMTVNLK EAIRQAKERV IFINTGFLDR TGDEMHTSMN AGPFVRKGDM KSQTWLPAYE QWNVDIGLEV GLQGHAQIGK GMWAKPDEMQ EMMDTKIAHP QAGANTAWVP SPTGATLHSM HYHKVNVAEV QDSLKSRARA SVDDILTIPL AKNTNWTEEE KQQEIDNNAQ GILGYVVRWV NQGVGCSKVP DINDVGLMED RATLRISSQH IANWLHHNVV SEQQVMDAMK RMAKIVDEQN AGDADYQPMA TDLDNSYAFK AACDLVFKGR EQPSGYTEPL LHQARLDLKA SVGC
|
| |