Gene Pcryo_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1878 
Symbol 
ID4034399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2319428 
End bp2321632 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content45% 
IMG OID637974350 
Productmalate synthase G 
Protein accessionYP_581139 
Protein GI93006702 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00162992 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000109363 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCCAGT CTTCTAATGC CAATCGTGTT CAAAAAGGCA TTCTTGCCAT TGATCAGCAG 
CTGTTCGATT TTATCGAAAA TGAAGTGCTG CCGAAAGTCG GTATTGATTC AGACGGTTAC
TGGTCAGGTT TCGAAAAGGT CATCAAAGAG TTTACGCCAC GTAATAAAGC ACTGCTTGCA
ACGCGTGCTA AGATTCAAGG ACAGATTGAC CAATGGCACC TGCAACATCC TACCAAAAAT
GGCGACATTG ATTATCCAGC GTACAAAGCA TTTTTACAAG AAATTGGCTA CCTATTACCA
GAAGGCGAAG CGTTCAGTGT CAGCACAGAA AACGTCGATG ATGAGATTGC CCGTATTGCA
GGACCTCAGC TGGTAGTACC AGTACGTAAT GCTCGCTATG CGTTGAACGC CAATAATGCG
CGTTGGGGCA GCTTATATGA TGCTTTATAT GGCACCAATG TTATCAGTGA TGAAAATGGT
CAAGAAGCAA AAGGTGGCTA CAATCCAACA CGTGGCGCAG CCGTCGTCGC TTATGCCAAA
AAATTCCTAG ATGAAAATTT TGCCTTAGCA TCAGGCTCCT ATAGCGATGT AACAGGTTTT
AGAGTCGTTG ATGGTAAGCT TGAAATTGCG CAAGGCGATA GCAGCACGCA ACTAAAAGAT
GCCGCACAGT TTGCAGGTTT CGTAGGCGAC GCTGATAGTC CTAGCGCTGT GTTATTAAAG
AACAATAACT TGCATGCTGA GATTCAAGTT GATGGCAATC ATCCCATTGG CAAAGATGAT
CCTGCACATA TCAAAGACGT GTTATTAGAG TCGGCGCTGA CTGCGATACA AGATTGTGAA
GACTCCATCG CTGCTGTTGA TGCAGAAGAG AAGGTTGAAG CGTATCGCAA TTGGTTTGGC
TTGATGAATG GCGATTTGCA AGAAACCTTT GAGAAAGGCG GCAAGACCCG TACGCGTAAA
CAGAATCCTG ATCGCGAATA TACTACGCCA GAGGGTGATA CGCTGACCTT GCCAGGTCGC
TCACTTTTAT TGCTACGTAA CGTCGGACAT CTCATGCAAA ATCCATCGAT TTTGGTAGAT
TTAGGCAATG GTCAAGAAGA GGTTTTCGAA GGTTTAATGG ATGGTTTGAT TACGCCTTTA
TTATCATTGA ATGATTTAAA AGGTAAAACC GAGCTATCAA ACTCACGTAA AGGTTCAATG
TATATTGTTA AACCAAAAAT GCATGGTCCT GATGAGGTGA AGATGGCGAA TGACTTATTT
AACGCCTCAG AAGACCTACT GGGCTTAGAG CGTTATACGA TAAAGATCGG CATTATGGAT
GAAGAACGCC GTATGACGGT CAACTTAAAA GAAGCCATTC GCCAAGCAAA AGAGCGTGTT
ATTTTCATCA ATACCGGCTT CTTAGATCGC ACAGGTGATG AGATGCACAC CAGTATGAAT
GCAGGTCCAT TTGTCCGCAA AGGCGATATG AAGTCGCAAA CGTGGCTGCC TGCTTATGAG
CAATGGAACG TCGATATCGG TCTTGAAGTA GGCTTACAAG GTCACGCGCA GATTGGTAAA
GGCATGTGGG CAAAACCTGA TGAAATGCAA GAGATGATGG ACACCAAAAT TGCCCATCCA
CAGGCAGGTG CTAATACGGC GTGGGTGCCA TCTCCAACGG GTGCTACCTT ACACAGCATG
CACTATCATA AAGTCAATGT TGCTGAGGTT CAAGACAGCC TGAAATCACG TGCGCGCGCT
AGCGTAGATG ATATCTTAAC CATTCCATTG GCAAAAAACA CCAATTGGAC TGAAGAAGAA
AAACAGCAAG AGATTGATAA TAATGCTCAA GGTATCCTAG GCTATGTCGT ACGTTGGGTA
AACCAAGGCG TTGGTTGCTC TAAAGTACCT GACATCAATG ACGTCGGCTT GATGGAAGAT
CGTGCGACAT TGCGTATCTC AAGTCAGCAT ATTGCCAATT GGTTACACCA TAATGTTGTC
AGCGAGCAGC AAGTGATGGA CGCTATGAAA CGTATGGCTA AAATCGTCGA TGAGCAAAAC
GCTGGTGATG CTGATTATCA ACCAATGGCG ACTGACTTGG ACAACTCCTA TGCTTTCAAA
GCCGCTTGTG ATTTGGTATT TAAAGGTCGC GAGCAGCCAA GTGGTTATAC TGAGCCATTA
TTGCATCAAG CACGTCTAGA TCTAAAAGCC AGTGTTGGCT GCTAA
 
Protein sequence
MSQSSNANRV QKGILAIDQQ LFDFIENEVL PKVGIDSDGY WSGFEKVIKE FTPRNKALLA 
TRAKIQGQID QWHLQHPTKN GDIDYPAYKA FLQEIGYLLP EGEAFSVSTE NVDDEIARIA
GPQLVVPVRN ARYALNANNA RWGSLYDALY GTNVISDENG QEAKGGYNPT RGAAVVAYAK
KFLDENFALA SGSYSDVTGF RVVDGKLEIA QGDSSTQLKD AAQFAGFVGD ADSPSAVLLK
NNNLHAEIQV DGNHPIGKDD PAHIKDVLLE SALTAIQDCE DSIAAVDAEE KVEAYRNWFG
LMNGDLQETF EKGGKTRTRK QNPDREYTTP EGDTLTLPGR SLLLLRNVGH LMQNPSILVD
LGNGQEEVFE GLMDGLITPL LSLNDLKGKT ELSNSRKGSM YIVKPKMHGP DEVKMANDLF
NASEDLLGLE RYTIKIGIMD EERRMTVNLK EAIRQAKERV IFINTGFLDR TGDEMHTSMN
AGPFVRKGDM KSQTWLPAYE QWNVDIGLEV GLQGHAQIGK GMWAKPDEMQ EMMDTKIAHP
QAGANTAWVP SPTGATLHSM HYHKVNVAEV QDSLKSRARA SVDDILTIPL AKNTNWTEEE
KQQEIDNNAQ GILGYVVRWV NQGVGCSKVP DINDVGLMED RATLRISSQH IANWLHHNVV
SEQQVMDAMK RMAKIVDEQN AGDADYQPMA TDLDNSYAFK AACDLVFKGR EQPSGYTEPL
LHQARLDLKA SVGC