Gene Pcryo_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1874 
Symbol 
ID4034395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2313950 
End bp2314825 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID637974346 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_581135 
Protein GI93006698 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.552524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000769457 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAAAACC TACTAACCGC GCAGTCGCAT ATTCAACTTA ATACACCTGA TAATAAAAAC 
ATCAGTATCG GTAATGATCA GCCATTTGTC TTATTTGGTG GCATGAATGT TTTAGAGTCT
AAAGAGATGG CATTTGAGAT CGCTGAGCAG TATGTTGATA TTTGCCAGCG TTTGGGTATC
GGCTATGTGT TTAAAGCCAG TTTTGATAAG GCCAATCGCT CAAGTTTGAC CTCGTATCGT
GGTCCGGGGC TAGAGAAAGG TATCGATTGG CTTGGGCAAA TCAAAGAAAA ATTCCAAGTA
CCGATTATTA CGGATGTCCA CGAACCTTAT CAAGCGGCAC CAGTCGCTGA AGTAGCTGAT
ATTATCCAGT TGCCTGCGTT TTTATCCCGT CAGACGGATT TAGTACATGC GATGGCGAAG
ACGGATGCGA TTATTAATAT TAAAAAAGCG CAGTTTTTAG CCCCACATGA GATGCGTCAT
ATCGTCAATA AATGTCTTGA GGGCGGTAAC GATAAGCTTA TCCTGTGTGA GCGCGGTAGT
GCCTTTGGTT ATAATAACCT AGTGGTTGAT ATGCTGGGTT TTGATACCAT GAAGCAGATG
GAGATACCAG TGTTCTTTGA TGTGACGCAT AGTTTGCAGC AGCCAGGCGG CCGTAGTGAT
AGTGCAGGTG GTCGCCGTGA GCAGATCACC ACGCTGGCAC GTGCTGGCAT GGCAACAGGG
ATTGCAGGAT TGTTTTTAGA GGCGCATCCA AATCCAGAAG TGGCAAAATG TGATGGTCCT
TGTGCGCTAC GTATGAGCCA ATTAGAGCCT TTCTTACGCC AGCTTAAACA GCTTGATGAC
TTGGTCAAAG GCTTTGAGAC CTTGGATACT CATTAA
 
Protein sequence
MENLLTAQSH IQLNTPDNKN ISIGNDQPFV LFGGMNVLES KEMAFEIAEQ YVDICQRLGI 
GYVFKASFDK ANRSSLTSYR GPGLEKGIDW LGQIKEKFQV PIITDVHEPY QAAPVAEVAD
IIQLPAFLSR QTDLVHAMAK TDAIINIKKA QFLAPHEMRH IVNKCLEGGN DKLILCERGS
AFGYNNLVVD MLGFDTMKQM EIPVFFDVTH SLQQPGGRSD SAGGRREQIT TLARAGMATG
IAGLFLEAHP NPEVAKCDGP CALRMSQLEP FLRQLKQLDD LVKGFETLDT H