Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1866 |
Symbol | |
ID | 4035200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 2304990 |
End bp | 2305730 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637974337 |
Product | ribonuclease T |
Protein accession | YP_581127 |
Protein GI | 93006690 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00131644 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0390394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTA AAAAAGATAC CGCTTTACCC AAAATAGATG TAGCCGTTCC TATAGAGTCG ACGACAGAAA CGCTAGCACC CCTGAAACTA AAAGAGCGTT TTCGGAAATT CCTACCAGTA GTAGTGGATG TTGAAACGGC AGGATTTAAC GCGCAAACTG ATGCCTTGTT AGAGATTGCC TGTATTCCTG TACTACTGAA TGAGCAGGGT GTTTTTTATC CTGGTGAGGC ATTTAATGCT CATATCGAAC CTTTTGAAGG GGCAAATCTT GAGCCAAGTG CCCTCGCCTT TACCGGCATT GACCCTAACA ATCCGCTGCG TAAAGCCATT GCTGAAGACG AAAAAACGGC GCTACGTCGT ATTTTTAAAG GGTTAAAAGA AGTACGCCGT ATTGAAGACT GCCGTCAATG TGTGTTAATC GGACATAATG CACATTTTGA TTTGGCATTT TTAAATGCCG CGGTATTACG TACCAATAAT AAGAGCCACA ATCCTTTCCA TAACTTCTCA GTCTTTGATA CGGTGACTTT ATCAGCACTT GCCTTTGGTC AAACGGTGCT AGCACGTGCC TGTAAAGCCG CAGGACTTGA TTTTGATGGT AACGACGCTC ATTCTGCACT CTACGACACG CAAAAAACCG CTGAGCTGTT TTGTTATATC TTAAATAATT ATCCTATGCT CGCTAATGCC ATGCACAGCG AGCCTGAAAT CACAGAAACT GCGACTGATA ATAGCAAATA A
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Protein sequence | MTIKKDTALP KIDVAVPIES TTETLAPLKL KERFRKFLPV VVDVETAGFN AQTDALLEIA CIPVLLNEQG VFYPGEAFNA HIEPFEGANL EPSALAFTGI DPNNPLRKAI AEDEKTALRR IFKGLKEVRR IEDCRQCVLI GHNAHFDLAF LNAAVLRTNN KSHNPFHNFS VFDTVTLSAL AFGQTVLARA CKAAGLDFDG NDAHSALYDT QKTAELFCYI LNNYPMLANA MHSEPEITET ATDNSK
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