Gene Pcryo_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1866 
Symbol 
ID4035200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2304990 
End bp2305730 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID637974337 
Productribonuclease T 
Protein accessionYP_581127 
Protein GI93006690 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00131644 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0390394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA AAAAAGATAC CGCTTTACCC AAAATAGATG TAGCCGTTCC TATAGAGTCG 
ACGACAGAAA CGCTAGCACC CCTGAAACTA AAAGAGCGTT TTCGGAAATT CCTACCAGTA
GTAGTGGATG TTGAAACGGC AGGATTTAAC GCGCAAACTG ATGCCTTGTT AGAGATTGCC
TGTATTCCTG TACTACTGAA TGAGCAGGGT GTTTTTTATC CTGGTGAGGC ATTTAATGCT
CATATCGAAC CTTTTGAAGG GGCAAATCTT GAGCCAAGTG CCCTCGCCTT TACCGGCATT
GACCCTAACA ATCCGCTGCG TAAAGCCATT GCTGAAGACG AAAAAACGGC GCTACGTCGT
ATTTTTAAAG GGTTAAAAGA AGTACGCCGT ATTGAAGACT GCCGTCAATG TGTGTTAATC
GGACATAATG CACATTTTGA TTTGGCATTT TTAAATGCCG CGGTATTACG TACCAATAAT
AAGAGCCACA ATCCTTTCCA TAACTTCTCA GTCTTTGATA CGGTGACTTT ATCAGCACTT
GCCTTTGGTC AAACGGTGCT AGCACGTGCC TGTAAAGCCG CAGGACTTGA TTTTGATGGT
AACGACGCTC ATTCTGCACT CTACGACACG CAAAAAACCG CTGAGCTGTT TTGTTATATC
TTAAATAATT ATCCTATGCT CGCTAATGCC ATGCACAGCG AGCCTGAAAT CACAGAAACT
GCGACTGATA ATAGCAAATA A
 
Protein sequence
MTIKKDTALP KIDVAVPIES TTETLAPLKL KERFRKFLPV VVDVETAGFN AQTDALLEIA 
CIPVLLNEQG VFYPGEAFNA HIEPFEGANL EPSALAFTGI DPNNPLRKAI AEDEKTALRR
IFKGLKEVRR IEDCRQCVLI GHNAHFDLAF LNAAVLRTNN KSHNPFHNFS VFDTVTLSAL
AFGQTVLARA CKAAGLDFDG NDAHSALYDT QKTAELFCYI LNNYPMLANA MHSEPEITET
ATDNSK