Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1859 |
Symbol | |
ID | 4035193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2294738 |
End bp | 2295727 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637974330 |
Product | LysR family transcriptional regulator |
Protein accession | YP_581120 |
Protein GI | 93006683 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0738691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGC AGCGGGTTGA TTTAAATTTA TTGGTACATT TGGATGTTTT GTTGCGAGAA AAAAACGTAA CGCGCGCCGC TGAGCAGCTA GGCATTACTC AGCCGGCGAT GAGTAATATT TTGCGCCGCT TGCGTAAGTT GTTTAACGAC CCTTTATTGG TGCGTTCATC AGAAGGGATG ACACCGACCG AGCGCGCCCT TGAATTACAG CCTCGTATCC GTGAGATACT TGCCGATTTG ACACAAGTGT TAGAGCCACG TACTGAGTTT CGTCCTTATA GCACCTCACG CGTTTTTCGT ATTATGACCT CAGATTATGC TGAGGCGACC TTGGTACCAA AATTGGTGAA AGCGCTACGC TCAGAGGCAC CCAATGTCAT TTTAGATTTC TTAACGCCAT CGGATGTGTC TTATCGTGAT ATGGAGCAGG GGCGTGTAGA TTTGGCAATC AACCGCTTTA ACGAGATCCC GCAAAGCTTC CATCAAGTGT TGGTATGGCG TGATACCTTT AGCTGCCTGT TATCCTCTGA AAGTCCTTAT GCTCATCGCT TTAATCTCAA AAACTATCTT AAAGCGCAGC ACGTTTGGGT ATCAAAAACT GGTATGGGCG TGGGCTTCGG TGTCAATCCA GAAAAATCTG GTGGCTTAGG TTCTATCGAT CAAGCGTTGC AGCGTTTAGG TCAAAAACGT CAAATCAGCG TCTTTACCCG TCACTATCAG ATGCCTGCTA TGCTGGCCGC AAACAAAGAT TTGATTGCGA CTTTGCCGAC TCGTGTCGCA AAAATGCAGG CTAATAACGA CAGCATTATT ATGGAAGAGC CACCGTTTTT TATACCAGAA TTTGAGCTAA CGATGGCGTG GTCGCCGTTA TTGCAGCATC ATCCGGCGCA TCGCTGGTTA CGTCAGCTGA TTATGCACGT AGCACGTCAA ATCGTTAATG ATGAAGAAAA TCCACCACAA GAAATCCCTG TGATCAATCA CTTATTTTAG
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Protein sequence | MNLQRVDLNL LVHLDVLLRE KNVTRAAEQL GITQPAMSNI LRRLRKLFND PLLVRSSEGM TPTERALELQ PRIREILADL TQVLEPRTEF RPYSTSRVFR IMTSDYAEAT LVPKLVKALR SEAPNVILDF LTPSDVSYRD MEQGRVDLAI NRFNEIPQSF HQVLVWRDTF SCLLSSESPY AHRFNLKNYL KAQHVWVSKT GMGVGFGVNP EKSGGLGSID QALQRLGQKR QISVFTRHYQ MPAMLAANKD LIATLPTRVA KMQANNDSII MEEPPFFIPE FELTMAWSPL LQHHPAHRWL RQLIMHVARQ IVNDEENPPQ EIPVINHLF
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