| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1849 |
|---|
| Symbol | |
|---|
| ID | 4035183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2282158 |
|---|
| End bp | 2284155 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637974320 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_581110 |
|---|
| Protein GI | 93006673 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.322822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTC CAATTAGCGA ACGTAAATTA GCCAATGCCA TCCGCGTACT GTCGTTTGAC
GCGGTTCAAA AAGCCAATTC TGGGCACCCG GGTGCACCAA TGGGCATGGC TGATATTGCC
GAAGTTTTGT GGCGCAAGTT TTTAAAGCAT AATCCTGCTG ACCCAAGCTG GCACAACCGT
GATCGTTTTG TCTTATCAAA CGGTCATGGG TCGATGCTTA TCTATTCATT GCTACATTTA
TCAGGCTATG ACGTTAGCGT TGATGACCTA AAAGGTTTCC GTCAATTACA TTCGAAAACG
CCGGGTCATC CAGAGCTTGG CTATACGCCA GGTGTTGAAA CCACCACTGG TCCATTAGGA
CAGGGTATTG CCAATGCGGT TGGTTTTGCA ATTGCAGAAA AAACGTTGGC AGCGCAATTT
AATCGTGATG GTCATAATAT TGTCGATCAT CATACTTATG CGTTTTTAGG CGATGGCTGC
TTGATGGAAG GTATTAGCCA TGAAGTCTGC TCATTGGCTG GCACGTTAGA GCTTGGCAAA
TTGGTATTTT TCTATGATGA CAATGGCATC TCTATCGATG GTAATGTCGA AGGTTGGTTC
ACTGATGATA CGCAAGCGCG CTTTGAGTCT TATGGCTGGC AAGTTATCAA GGTCGATGGT
CATGATACTG ATGAGATTAC GCAAGCAACT GAGCAAGCGA TTAAAGAAAC GACTAAGCCA
AGCTTAATCA TTTGCAAAAC GACTATTGGC GCTGGTAGCC CAAATAAACA AGGCTTAGCA
GCCAGTCATG GCGCGCCACT TGGCGATGAT GAAATCGTTT TAACCCGTGA TGCATTATCT
TGGACGCATG CGCCGTTTGA GCTAGATGAT GAAATCTATC AAGCGTGGGA TGGTAAAGCG
AAAGGCGACG TCTTACAGAA AAACTGGAAC GCGAACTTTG ACGCTTATAA GAAGGCTTAT
CCAGAGTTAG CAACTGAGTT GCTTCGTCGT TTAGAGGGTG ACTTACCAGC TGATTTTGAG
CAAAAAGCGC AAGAGTATAT CCAGCAAACT CAAGAGCAGG GCGGTGATGT TGCCAGTCGT
AAGGCCAGCC AAAATGCCAT CAATACCTTA CAGCCATTAC TGCCAGAATT ACTTGGTGGC
TCAGCGGATT TAGCAGGCTC AAACCTCACG CTATTTAAAG ACGCCAAAGG CATCCAAGAC
GATGACGCGG GCAACTATAT CTATTATGGT GTGCGCGAAT TCGGTATGAC GGCCATTGCT
AACGGTATCG CGTTACATGG CGGCTTTGTT CCTTATGTTG CGACGTTCCT GATGTTTATG
GAATACGCAC GTAATGCGGT ACGTATGGGC GCGCTCATGA AGCAGCGTGT GATTCATGTC
TATACTCATG ACTCAATCGG TCTCGGTGAA GATGGTCCAA CGCATCAGCC AGTTGAGCAA
TTGACCAGCT TACGTACCAC GCCAAATCTA CGTACATGGC GTCCTTGTGA TGCGACTGAA
TCAGCAAGCG CTTGGGTTGA GGCAATTAAA TCAGAAAATA ATCCATCTGC CTTGATTTTC
AGTCGTCAAA GCTTGCCACA CCAAGCGCGT GACCGCGAGC AAGTAGCAAA CATCACCAAA
GGTGGTTATG TACTTGCAAA AGAGCAAGGC GAGCTACAAG CGATTATCAT CGCAACTGGC
TCAGAAGTCG GTCTTGCTAT GCAAGCTTAC GCGACCTTGA GCGAAAATGG CGTCGGTGTA
CGTGTGGTCT CTATGCCGTG TGCAGAAATC TTCGTTGAGC AAGATACTAG CTACCGTGAA
GCGGTATTGC CTGCCAATAC TCGCGCCCGC GTCGCAGTAG AAGCAGCACA CGTCGATTAC
TGGTATAAGT TCGTTGGTTT AGACGGTAAA GTGATTGGCA TGACGACTTA TGGTGAATCA
GCGCCTGCTG ATGAGTTATA TAAAGAGTTT GGTATCACCA CTGAAGCCGT GGTTGATGCG
GTGAATAGCT TGGTGTAA
|
|---|
| Protein sequence | MPAPISERKL ANAIRVLSFD AVQKANSGHP GAPMGMADIA EVLWRKFLKH NPADPSWHNR
DRFVLSNGHG SMLIYSLLHL SGYDVSVDDL KGFRQLHSKT PGHPELGYTP GVETTTGPLG
QGIANAVGFA IAEKTLAAQF NRDGHNIVDH HTYAFLGDGC LMEGISHEVC SLAGTLELGK
LVFFYDDNGI SIDGNVEGWF TDDTQARFES YGWQVIKVDG HDTDEITQAT EQAIKETTKP
SLIICKTTIG AGSPNKQGLA ASHGAPLGDD EIVLTRDALS WTHAPFELDD EIYQAWDGKA
KGDVLQKNWN ANFDAYKKAY PELATELLRR LEGDLPADFE QKAQEYIQQT QEQGGDVASR
KASQNAINTL QPLLPELLGG SADLAGSNLT LFKDAKGIQD DDAGNYIYYG VREFGMTAIA
NGIALHGGFV PYVATFLMFM EYARNAVRMG ALMKQRVIHV YTHDSIGLGE DGPTHQPVEQ
LTSLRTTPNL RTWRPCDATE SASAWVEAIK SENNPSALIF SRQSLPHQAR DREQVANITK
GGYVLAKEQG ELQAIIIATG SEVGLAMQAY ATLSENGVGV RVVSMPCAEI FVEQDTSYRE
AVLPANTRAR VAVEAAHVDY WYKFVGLDGK VIGMTTYGES APADELYKEF GITTEAVVDA
VNSLV
|
|---|
| |