| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1831 |
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| Symbol | |
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| ID | 4033788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2260156 |
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| End bp | 2262660 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637974300 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_581092 |
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| Protein GI | 93006655 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGGTG TGGCAGTATC TATTAGCCAC GCCGCGGCAC TGAGTGAAGA TATCTCTACG
AGCAGCGTTG ATACCAACGC TGCTTTTTTG CGTGTTGCGA AAGCTATGGA GCCTACAATT
CAGGCTCAAA CGGATACCAT TGCTCAGGCT AATATAGATG CGGATTTGGC TCAGCTTGAT
TTGGACCGTT ATAGTGATGA TGACGATGCA GGGCTGGATT TATATCTGGA CGTCACGCTG
AATGGTGCCA GTAAGGGTCT AGTACACTTC GACTACCGTG ATGAGCGCCT TTGGGCAACA
GCAGCTATCT TGCAACAGCT GAGCTTTGTG TTGCCTCCAT CGCTACAGGC AAGCCGTGAC
CCTATCGCCC TTGACAGCCT ACCTAAGCTG AATATTGACT ACGATGCACG CCAGCAAACA
CTCACCCTTA TTGCTCCACT CGATATGCTC AAGCTAGATA CGACTACCCA TAGTACGCGC
ACCAATAAGC GCCCAAAAGC GAGCGCCTCG CCCGGTCTGT TATTAAACTA TGACCTGTAT
GGCAGTCAAA CTCAGAATAG CACTAAAAGT CTGAGCGCCT ATACGGAGCT GCGCGCCTTT
AATGCGCTTG GCGTGGTCAG CTCTACCGCC TTAACGACTG CAAATACGGC TGCTAATGAC
AGTCGCCACA GTCAGTGGAA GGGTCAAACC GTGCGCCTTG ATACTAGCTG GAGTCAATCC
TTCCCTGATA AGCTGCTGAC GGTTCGGGCA GGCGATATTC TGACCGGTGC ATTATCGTGG
ACGCGGTCGA CACGTTTGGG CGGTCTACAA ATCGGCACCA ACTTTAATCT GCAGCCTTAT
CGCTCGACCA CACCGTTGCC ATCGTTTTTT GGCTCAGCAA CTCTACCCTC AAAGGTAGAG
CTGTTTGTTG ATGGTCTTAA ACACTATAGC GGTGAGGTGC CCGCCGGTCC CTTTGAGCTG
GACACCGCGC CTAGTATCAG TGGCGCAGGA ACGGCGCAAC TGGTGGTCAC CGATGCCTTG
GGTCAAAGCA AGACGCTAAA CTTTTCCTTA TATGACACCC ATCGACTGCT CCAGCCCGGA
CTGTCTGATT GGTCAGTTGA GATGGGCGCA GTGCGTGAAA ATTATGGGAC GGAATCTTTT
GATTATGGGG ATGCGCTTGC CGCCAGTGGA ACTTGGCGCC ATGGGGTGTC CAACCGTTTT
ACCGCTGAAA CCCATGCCGA AGTGACGCAC GGTCTCTCCA ATGCAGGTGT CGGTGGGACT
TGGCTATTGG GGCGCGCTGG TGGTATTTTG TTTGCCTCGC TAGCCGCAAG CCATAGTCAG
GGACAAAGCG GCATGCAGTA CAGCACCAAT TATTCATGGA ATAATCGTCG CTTTAACATT
GGTTTTAATG CGCTGGGAAC TTCTGGTGTA TATCGCGATG TAGGCTCCCA ATATGGCAAT
GCCCCTGTAC ATCGAAGTGA GCAAATATCT ACTGGTTATA GCATACCGAC GCTCGGTAAT
TTTGGGCTAA GTTACCATCA GGTTGCCCAA GCTGAAAAAG AGGACACGCA ATTTGCCCGT
GTCTCTTGGT CCAAATCCTT TGGCAGACGA GTAAGTATGA ACCTCAATTA TAACCATGAC
TTTGACCAAT CAGCAAAAAG TAGCCTGTCG ATAGGCGCAT CGCTATCACT AGATCGCAAT
ATGTCAATGC GAAATAGCTT GCAACACACC GCAGCGCAAG ACATCATCAC AGCAGATATC
TCAAAATCAG CGCCAAGCGC AGGTGGCATT GATTGGCGCG CGCAGGTACG CCACAGCGCG
GCTAGCCAAT CAGACGACAG CTTAAATAGT AATACTAAAG ACAGTACAGG CGCGTTGGCT
GAGCTGAGCT ACCTTGGACG CTACGGACGG GTTCAGGCTG GTATCAGTAG TAATGATGAC
AGCTATGCCA CTTACGCCAG TGGCACAGGG TCACTTGTGA TGATGGGCGG CGGCATGTTT
CCTGCGCGCC AAATTAATAG CGGATTTGCG GTGGTATCGA CTGGCGGTAT CGCTGATGTG
CCCGTCCTAT TGCAAAACAA TCCTATTGGC ACGACCAACC ACCGCGGGCT GCTGCTAGTG
ACACCGCTCA ATGCCTATCA AGAGAATAAG ATTGCTATCG ACCCCATGCA GTTGCCTGCT
GACTTACGTA TTAATAAAGT CAGTCTGGAC GCAACCCCAA CCGACCGTGC CGGAGTTATG
GTCGCTTTTG ATATTACCCC TGTGCGCTCA GCAACCATTG TATTAATCGA TAGCGATGAG
CAACCGATTG CACTTGGTAG TCAAGTCACC TTGATCTCCA ACGAAGATAC GCCAACCACT
GTAGTGGGTT TTGATGGTGA GGTATATTTG GATACATTGG ATGCCCACAA TACACTGGAG
GTCACTACCC CTGCTGATGG CATTTGTACT GTGCGCTTTA AGTACACCAA GCAAGGCGAT
GAGATTCCGC TCCTCGGTCC TTTTATCTGT AAAAAGGTAC AATAA
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| Protein sequence | MQGVAVSISH AAALSEDIST SSVDTNAAFL RVAKAMEPTI QAQTDTIAQA NIDADLAQLD
LDRYSDDDDA GLDLYLDVTL NGASKGLVHF DYRDERLWAT AAILQQLSFV LPPSLQASRD
PIALDSLPKL NIDYDARQQT LTLIAPLDML KLDTTTHSTR TNKRPKASAS PGLLLNYDLY
GSQTQNSTKS LSAYTELRAF NALGVVSSTA LTTANTAAND SRHSQWKGQT VRLDTSWSQS
FPDKLLTVRA GDILTGALSW TRSTRLGGLQ IGTNFNLQPY RSTTPLPSFF GSATLPSKVE
LFVDGLKHYS GEVPAGPFEL DTAPSISGAG TAQLVVTDAL GQSKTLNFSL YDTHRLLQPG
LSDWSVEMGA VRENYGTESF DYGDALAASG TWRHGVSNRF TAETHAEVTH GLSNAGVGGT
WLLGRAGGIL FASLAASHSQ GQSGMQYSTN YSWNNRRFNI GFNALGTSGV YRDVGSQYGN
APVHRSEQIS TGYSIPTLGN FGLSYHQVAQ AEKEDTQFAR VSWSKSFGRR VSMNLNYNHD
FDQSAKSSLS IGASLSLDRN MSMRNSLQHT AAQDIITADI SKSAPSAGGI DWRAQVRHSA
ASQSDDSLNS NTKDSTGALA ELSYLGRYGR VQAGISSNDD SYATYASGTG SLVMMGGGMF
PARQINSGFA VVSTGGIADV PVLLQNNPIG TTNHRGLLLV TPLNAYQENK IAIDPMQLPA
DLRINKVSLD ATPTDRAGVM VAFDITPVRS ATIVLIDSDE QPIALGSQVT LISNEDTPTT
VVGFDGEVYL DTLDAHNTLE VTTPADGICT VRFKYTKQGD EIPLLGPFIC KKVQ
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