Gene Pcryo_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1803 
Symbol 
ID4034805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2226618 
End bp2227499 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content39% 
IMG OID637974272 
ProductHAD family hydrolase 
Protein accessionYP_581064 
Protein GI93006627 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0790667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCAG GAAGAAATCC CAGTATAAAT AGGCGACCTA TCTATATTCT GCCAAAAAAC 
TTTGCTGAAT ATTTATGCCC TCAGCAAAAT TATTATTTGT TTCTAGATAT AGATGGTACG
TTAGCGGATT TCACACTGAA TCCAAAAGAC AGCGTTATCC CAACATCAAC CTTAACTCTT
CTACAAAAAA TACAAAGCCA TGGTGTAAAA CTTGCTGTCG TAACAGGACG CAGTTTGGCT
GAAGCAAGGC AAATGCTGTC TCCTTTAGTG TTACCGATTG CCGCAACGCA TGGACTAGAA
ATAGCGTTTG ATGATATCAG TGATCATAAT GAGACACATG TTGTATCTGT TGATATCATG
GAACTTGCTG TAATAAGAAA GTCTATTATC CAATCTTGCA TTCCCTTTGA TGACTTCACC
GTAGAAGATA AACCCTATTC TGTCGCCCTC CATTTCCGAA AGAACCCTGT TTTGGCTGAT
GCGGCTTATA CCATCATGAT AGAAACCTTA AAAACTTATG CTAACTGGAC ATTGAAATCT
GGTAAATATG TTTGGGAGGT AGTGCCAAAA GGAGTGGATA AAGGTAGCGC AATTCTGACT
TTATTAAAAA GAATGCAGAG TAGTAATAAT ATGTTCCCTA TTTTTATCGG TGATGATATT
ACGGATGAAG TAGGGTTTGT GGCTGTACAA GGTGAAAATC AAATAATAGC CAGTCAACCA
CAGCCATTAA AAGGGATGGG GATTAAGGTT GGTAGTGAGG CTACGCATGC CAATTACTAT
GTACGTAATA CTCATGAGGT CACCATATTA CTGAATAGCT TTTTAAGCTT TTGCCAAGAG
CATTCAATGC TAGCAAAAGA AACAGTGAGG CACGTGATAT GA
 
Protein sequence
MTSGRNPSIN RRPIYILPKN FAEYLCPQQN YYLFLDIDGT LADFTLNPKD SVIPTSTLTL 
LQKIQSHGVK LAVVTGRSLA EARQMLSPLV LPIAATHGLE IAFDDISDHN ETHVVSVDIM
ELAVIRKSII QSCIPFDDFT VEDKPYSVAL HFRKNPVLAD AAYTIMIETL KTYANWTLKS
GKYVWEVVPK GVDKGSAILT LLKRMQSSNN MFPIFIGDDI TDEVGFVAVQ GENQIIASQP
QPLKGMGIKV GSEATHANYY VRNTHEVTIL LNSFLSFCQE HSMLAKETVR HVI