Gene Pcryo_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1779 
Symbol 
ID4033966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2202067 
End bp2202711 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID637974248 
Productcytochrome c, class I 
Protein accessionYP_581040 
Protein GI93006603 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0282319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGA TCAAACCAAA CCTGCTTGCT GTGGTAATGA TATTAGGTAT CGGAAGCACA 
GTCGCGCTAT CAGGCTGTAG CCAATCCACT AAAGCCAACG CTGTCACTTT CGCCAGCCAG
CAACAAACCA CGCAAATGGT CTTTGATAAT CAAGCCAGTC GCAATAATGG TGCATGGGGT
GCAGTGTATA TGACTAGAGA AGCGCTTAGA TCGCCAACAG CCAATATCGT CGATGTCAGC
TCACTACCGA AAATGGTAGA AGATGCTAGC TTGCAAAAGT GGTTAGCAAA GTTCGAAGGT
AGCTCTGAAG GTAAAAAGGG GTTTATTACT ACCAATGGTA AAAAGCTGTA TGATGATTCC
TGCGCTGGCT GTCATATGCA AGATGGTAAG GGCGCAAAGG GGGCAGGTTA CTATCCTCCG
CTTGCTGATA ACAGTAAGAT GCAATCAAAG TACTATATCA TTAGTGTTGT GATGAATGGC
TTACGCGGTA TGCCATCCTT TCAAAGTATG ATGAATGATG AACAAATAGC AGCGGTCACT
CAATATGTGC ATAGTGACCT TAATAAATTT ACCGATACAG TCACTGCTGC CAACGTTGCT
CAGCTCCGTC ATGAATTTCC ACCGGGTTCT GATCCGAGTG AATAA
 
Protein sequence
MDMIKPNLLA VVMILGIGST VALSGCSQST KANAVTFASQ QQTTQMVFDN QASRNNGAWG 
AVYMTREALR SPTANIVDVS SLPKMVEDAS LQKWLAKFEG SSEGKKGFIT TNGKKLYDDS
CAGCHMQDGK GAKGAGYYPP LADNSKMQSK YYIISVVMNG LRGMPSFQSM MNDEQIAAVT
QYVHSDLNKF TDTVTAANVA QLRHEFPPGS DPSE