| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1757 |
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| Symbol | |
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| ID | 4035258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2172607 |
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| End bp | 2173953 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637974225 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_581018 |
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| Protein GI | 93006581 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.071428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACT CTTATCTTGC GCTTGTAATA GCAACTGTAC TATCTGGAGC TGTACTGGTT
GGCTGTGACA AAAAAGAGGA TGCCGCTGGC GACGCGGCGG CGGCACAGCA ACAAATGCCG
CCCTCCGTCG TCAACGTTCA GACTGTTACT TTTGATACCG TACCACAAGT ACAGACTTTT
GCTGGACGTA CAGCGGCTTA TCAAACCGCT GACGTCCGCC CACAGGTAAA CGGCATTATC
GACGAAGTGT TGTTCCGTGA GGGCAGCAAC GTCAAAAAAG GTCAACCTTT ATATCGCATT
AATACGGATA ACTATGCGAC GTCTATTACC AGTGGTCAGG CGGCAATAGC CCAAGCAGAG
GCCAACTATC AGACGGCATT GGCTAATAAT GCCAATGCAA AAGCGGATTT GGCCAGCCGT
CAAGCGTCAT TATCACAAGC ACAAAATGAT TTGCAACGTC TGCAAGGTTT GGTGGCTATT
GATGCCATCT CAAAGCAGCA ATACGATCAA GCACAAACCG CTGTGCGTAC TGCACAAGCA
GCTGTCCAAA GCGCCAATGC TGCTATCGGT CAATCACAAG CCGGTATTGA AAGCGCAAAA
GCAGGTATCC AAACGGCGAA GGCTGGGTTG CAAGCGAGCA CTTTAGATCT CAATCGTACT
ATCGTACGTG CGCCTATCTC AGGTCGTACA GATCGCTCGA GCGTCACTGC CGGTACATTG
GTTAGCTCAG GTCAACCTAC TCCTTTAGTG ACTATCTCAC GCCTAGATCC TATCTATGTC
GATATCAGTC AATCATCCTC TGAGCTGCTT AAATTGCGTC AGCAGATCTC TGCAGGCAAA
GCAAAAACTG GCATGAACTC AGTTGAATTG GTGTTAGAGG ATGGTTCAAC CTATCCTGTA
CGTGGCGAGT TGGCATTGTC AGAGGCGAAA GTCGATGAAT CAACAGGGGC AGTGACCTTA
CGTGCCATCT TCCCAAATAA CAGCAATATC TTATTACCCG GTATGTATGT CACTGCGCGC
TTAACTCAAA GCGTCATTAC CAATGCGGCA TTAATTCCGC AAAGCGCAGT CACACGTACA
CCTAAGAGTG AAACGCAAGT CTATATCGTC GATGAAAACA ACAAAATCCA AGTTCGTCCG
GTCACGATTA ATGGTACTTA TCAAGGACGA TGGGTAGTCA CTGACGGTCT TCAAGCTGGC
GACAAAGTCG TGATTATCGG CGGCGCAAAA GTGAAGCCTG AACAAGAGGT TATTGCGAAG
CCATTAGAAA ATCCAAACCC TGCGCCTGCT GCAAAAGAAG CTGCTGCCAA AACACCGCAG
CAAGCTGCAC AATCAGCCGC CAAATAA
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| Protein sequence | MKHSYLALVI ATVLSGAVLV GCDKKEDAAG DAAAAQQQMP PSVVNVQTVT FDTVPQVQTF
AGRTAAYQTA DVRPQVNGII DEVLFREGSN VKKGQPLYRI NTDNYATSIT SGQAAIAQAE
ANYQTALANN ANAKADLASR QASLSQAQND LQRLQGLVAI DAISKQQYDQ AQTAVRTAQA
AVQSANAAIG QSQAGIESAK AGIQTAKAGL QASTLDLNRT IVRAPISGRT DRSSVTAGTL
VSSGQPTPLV TISRLDPIYV DISQSSSELL KLRQQISAGK AKTGMNSVEL VLEDGSTYPV
RGELALSEAK VDESTGAVTL RAIFPNNSNI LLPGMYVTAR LTQSVITNAA LIPQSAVTRT
PKSETQVYIV DENNKIQVRP VTINGTYQGR WVVTDGLQAG DKVVIIGGAK VKPEQEVIAK
PLENPNPAPA AKEAAAKTPQ QAAQSAAK
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