Gene Pcryo_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1723 
Symbol 
ID4034721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2132040 
End bp2133110 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content43% 
IMG OID637974189 
ProductrarD protein 
Protein accessionYP_580984 
Protein GI93006547 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.404594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.849801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACGA CCAATCAGAC CGTTCAGGGA ACTTTGGCTT CAGTATCATC AAGTTTTTTG 
TTTTCTTTGA TGTTTCTATT TGGGCTATTT ATGCTGCCAT TAACGGGTAC GCAGGTGGCT
TCGTGGCGTG TATTGATGAT GCTCCTGAGC CTAGTGCTAT TGGTCAGTCT TACAAAACAG
TGGCAGCATG TATTTGATTA TCTCAAAACA CTAAAGACGC CAAAAGAGTG GATTATTTTT
GTACTGCCAA CCCCAATTTT AGGTGGGCAG ATTTGGCTGT TTATGTGGGG ACCGGTCAAT
GGCTTTGGTC TTGATGTGAC CTTGGGCTAT TTTTTATTGC CGTTGGTCAT GATTGTGATT
GGGCGTTTTT TCTATCATGA GCATATGAGT GTTTTGCAAT GGTTAGCAGC GATATGTGCT
GCGCTCGGTA TCGGCTATGA TATATTGCAA TATGGCAGTA TATCTTGGGT AACCGCATTT
GCATGCTTGG GTTATCCGCC TTATTATTTG CTACGTCGTA AGCTTGCTGT GCCGCCTATT
ACAGGTCTGT TATCAGATTT GACGTTACTG ACGCCAGTGG TGCTAATTAT GCTTTATAGC
AGCGGCGGCT TTAGTGTAGC GGCGCAAAAT ACCAAATTTT GGTACATATT GCCCCTGCTA
GGCGCTTTTA GTGCGCTTGC CATGTCTCTA ACTATGGTTG CTAGTAGTAA GCTGCCAGTG
TCGTTATTTG GAGCGCTCAG CTACATAGAG CCTATGCTGC TATTTGTATT ATCTATTACT
GTGTTAAATC AAAGTCTGGA TGAAGGAGGC TCGTTATTCA TGTATGGCAT GATTACACTG
GCATTGTTTA TTATGATTGC TGATAGTATG AAAGGCTTTC TTATCCGACG CCGTGACAAT
CATTTGCATG GTTACCGAGA GCCACAAGTT GGGAGTTTCC CACCACGCCG CCGTTTTATC
GACCATCGTA TAGAAGGGGT ATTAAAGGCG CACCGTTTTC GTAAAATCAG GAAATACCAA
CAGCGAATAG ATAAAATCAC GCGTAAAATC CAAGCGTTAG ATTCAAAGTA G
 
Protein sequence
MLTTNQTVQG TLASVSSSFL FSLMFLFGLF MLPLTGTQVA SWRVLMMLLS LVLLVSLTKQ 
WQHVFDYLKT LKTPKEWIIF VLPTPILGGQ IWLFMWGPVN GFGLDVTLGY FLLPLVMIVI
GRFFYHEHMS VLQWLAAICA ALGIGYDILQ YGSISWVTAF ACLGYPPYYL LRRKLAVPPI
TGLLSDLTLL TPVVLIMLYS SGGFSVAAQN TKFWYILPLL GAFSALAMSL TMVASSKLPV
SLFGALSYIE PMLLFVLSIT VLNQSLDEGG SLFMYGMITL ALFIMIADSM KGFLIRRRDN
HLHGYREPQV GSFPPRRRFI DHRIEGVLKA HRFRKIRKYQ QRIDKITRKI QALDSK