| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1673 |
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| Symbol | rpsA |
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| ID | 4034572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 2058578 |
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| End bp | 2060269 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637974138 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_580934 |
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| Protein GI | 93006497 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000046796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.385935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAT TTGCTGAACT ATTTGAAGCG AGCATCGAAG AAACAGGTCT GGATATCGAG
CGTGGCTCGG TTATCACCGG TACTGTTGTC GCCATCGATA ACGACTGGAT CACTGTTGAT
ACGGGTCTAA AATCTGAAGG TATCGTCGCT CGTGAAGAGT TTTTAAGCGA AGAAGGCGAA
CTTGAAGTTG AAGTTGGCGA TACAGTAGAC GTAGTGGTTG AAGCGGTTGA TAACGGTATG
GGTCAAACCT TACTGTCACG TGAAAAAGCC AAACGCGTTG AAACTTGGAA TTTCCTTGAA
AAAATCTCTG ACAATGATGA GATTGTAAAA GGTATTATTT CTAGCAAAGT AAAAGGCGGC
TTTACTGTAG ATATCGGTTC AGTACGCGCT TTCTTGCCAG GTTCATTGGT AGATGTACGT
CCTATCCGTG ATACGACGCA TCTAGAAGGT AAAGAGTTAG AATTTAAAGT TATCAAACTT
GATCAAAAAC GTAACAACGT AGTAGTTAGT CGCCGTGCCG TTATGGAAGC TGAAAACTCA
GCTGAGCGCG AAGAGCTATT GAACAAGCTT GAAGAAGGTA TCGAGATTGA AGGTATCGTT
AAGAACCTAA CTGATTACGG TGCATTCGTT GATCTTGGTG GTATTGATGG TCTATTGCAC
ATCACTGATA TGGCATGGCG CCGTATTAAG CACCCATCTG AGGTTGTTGA AGTTGGTCAA
GATCTTAAAG TTAAAGTACT TAAATTTGAT CGTGAGCGCA ATCGCGTCAG CCTAGGTCTA
AAACAACTAG GTACTGATCC TTGGGATAAC GTTGGCGGCA CATACCCAGT GGGTAGCGTT
GTTAAAGCTC GTGTAACCAA CTTGACTGAT TATGGTTGTT TCGCTGAAAT CTCTGAAGGT
ATTGAAGGTC TAGTACACGT ATCAGAGATG GATCATACCA ACAAAAACAT CCATCCGTCG
AAAGTTGTTC AAGTGGGTGA TGAAGTTGAA GTAATGATCC TTGATATCGA CGAAGAACGT
CGTCGTATCA GCTTAGGTAT CAAGCAAACT CTAGCAAATC CATGGGATGA GTTTGATAAG
AAACATGAGC GCGGTGATAA AATCACTGGT ACGATCAAAT CAATCACTGA CTTCGGTATC
TTTATTGGTC TAGATGGCGG TATTGATGGT CTAGTTCACT TGTCAGACAT TTCTTGGAAT
GAAACTGGCG AAGATGCTAT CCGTAACTAC AACAAAGGCG ACACCGTTGA AGCAATGGTA
TTGTCTGTAG ACTCAGAAGC CAATCGTATC AGCCTAGGCG TGAAGCAATT AACGTCAGAT
CCATTTAACG AATACCTAGT CAACAATGAC CGCGGTGCTA TCGTTAATGG TAAAGTAAAA
GAAGTAGACG CTAAAGGCGC TACTATCGAA CTTGCTGATG AAGTTGAAGC GTATCTACGT
GCCTCAGAGA TTCAACGTGA CCGCGTTGAA GATGCGACTA AGCATCTAAC TGTTGGTGAT
GATGTAGAAG CGAAAATCAT CAGTGTTGAT CGTAAAACAC GTAATATCAG CCTGTCTATC
AAAGCGAAAG ACGAAGCTGA AGAGCGTCAA GCGATTAAAG AGTTAAGTAG CACAACTACG
ACTAGTACTG CTGCTGGTTC TGATGCACAA CCAAAAACAA TTGGTGACTT GATCAAAGAA
CAAATGCAGT AA
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| Protein sequence | MESFAELFEA SIEETGLDIE RGSVITGTVV AIDNDWITVD TGLKSEGIVA REEFLSEEGE
LEVEVGDTVD VVVEAVDNGM GQTLLSREKA KRVETWNFLE KISDNDEIVK GIISSKVKGG
FTVDIGSVRA FLPGSLVDVR PIRDTTHLEG KELEFKVIKL DQKRNNVVVS RRAVMEAENS
AEREELLNKL EEGIEIEGIV KNLTDYGAFV DLGGIDGLLH ITDMAWRRIK HPSEVVEVGQ
DLKVKVLKFD RERNRVSLGL KQLGTDPWDN VGGTYPVGSV VKARVTNLTD YGCFAEISEG
IEGLVHVSEM DHTNKNIHPS KVVQVGDEVE VMILDIDEER RRISLGIKQT LANPWDEFDK
KHERGDKITG TIKSITDFGI FIGLDGGIDG LVHLSDISWN ETGEDAIRNY NKGDTVEAMV
LSVDSEANRI SLGVKQLTSD PFNEYLVNND RGAIVNGKVK EVDAKGATIE LADEVEAYLR
ASEIQRDRVE DATKHLTVGD DVEAKIISVD RKTRNISLSI KAKDEAEERQ AIKELSSTTT
TSTAAGSDAQ PKTIGDLIKE QMQ
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