Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1673 |
Symbol | rpsA |
ID | 4034572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2058578 |
End bp | 2060269 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637974138 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_580934 |
Protein GI | 93006497 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000046796 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.385935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAT TTGCTGAACT ATTTGAAGCG AGCATCGAAG AAACAGGTCT GGATATCGAG CGTGGCTCGG TTATCACCGG TACTGTTGTC GCCATCGATA ACGACTGGAT CACTGTTGAT ACGGGTCTAA AATCTGAAGG TATCGTCGCT CGTGAAGAGT TTTTAAGCGA AGAAGGCGAA CTTGAAGTTG AAGTTGGCGA TACAGTAGAC GTAGTGGTTG AAGCGGTTGA TAACGGTATG GGTCAAACCT TACTGTCACG TGAAAAAGCC AAACGCGTTG AAACTTGGAA TTTCCTTGAA AAAATCTCTG ACAATGATGA GATTGTAAAA GGTATTATTT CTAGCAAAGT AAAAGGCGGC TTTACTGTAG ATATCGGTTC AGTACGCGCT TTCTTGCCAG GTTCATTGGT AGATGTACGT CCTATCCGTG ATACGACGCA TCTAGAAGGT AAAGAGTTAG AATTTAAAGT TATCAAACTT GATCAAAAAC GTAACAACGT AGTAGTTAGT CGCCGTGCCG TTATGGAAGC TGAAAACTCA GCTGAGCGCG AAGAGCTATT GAACAAGCTT GAAGAAGGTA TCGAGATTGA AGGTATCGTT AAGAACCTAA CTGATTACGG TGCATTCGTT GATCTTGGTG GTATTGATGG TCTATTGCAC ATCACTGATA TGGCATGGCG CCGTATTAAG CACCCATCTG AGGTTGTTGA AGTTGGTCAA GATCTTAAAG TTAAAGTACT TAAATTTGAT CGTGAGCGCA ATCGCGTCAG CCTAGGTCTA AAACAACTAG GTACTGATCC TTGGGATAAC GTTGGCGGCA CATACCCAGT GGGTAGCGTT GTTAAAGCTC GTGTAACCAA CTTGACTGAT TATGGTTGTT TCGCTGAAAT CTCTGAAGGT ATTGAAGGTC TAGTACACGT ATCAGAGATG GATCATACCA ACAAAAACAT CCATCCGTCG AAAGTTGTTC AAGTGGGTGA TGAAGTTGAA GTAATGATCC TTGATATCGA CGAAGAACGT CGTCGTATCA GCTTAGGTAT CAAGCAAACT CTAGCAAATC CATGGGATGA GTTTGATAAG AAACATGAGC GCGGTGATAA AATCACTGGT ACGATCAAAT CAATCACTGA CTTCGGTATC TTTATTGGTC TAGATGGCGG TATTGATGGT CTAGTTCACT TGTCAGACAT TTCTTGGAAT GAAACTGGCG AAGATGCTAT CCGTAACTAC AACAAAGGCG ACACCGTTGA AGCAATGGTA TTGTCTGTAG ACTCAGAAGC CAATCGTATC AGCCTAGGCG TGAAGCAATT AACGTCAGAT CCATTTAACG AATACCTAGT CAACAATGAC CGCGGTGCTA TCGTTAATGG TAAAGTAAAA GAAGTAGACG CTAAAGGCGC TACTATCGAA CTTGCTGATG AAGTTGAAGC GTATCTACGT GCCTCAGAGA TTCAACGTGA CCGCGTTGAA GATGCGACTA AGCATCTAAC TGTTGGTGAT GATGTAGAAG CGAAAATCAT CAGTGTTGAT CGTAAAACAC GTAATATCAG CCTGTCTATC AAAGCGAAAG ACGAAGCTGA AGAGCGTCAA GCGATTAAAG AGTTAAGTAG CACAACTACG ACTAGTACTG CTGCTGGTTC TGATGCACAA CCAAAAACAA TTGGTGACTT GATCAAAGAA CAAATGCAGT AA
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Protein sequence | MESFAELFEA SIEETGLDIE RGSVITGTVV AIDNDWITVD TGLKSEGIVA REEFLSEEGE LEVEVGDTVD VVVEAVDNGM GQTLLSREKA KRVETWNFLE KISDNDEIVK GIISSKVKGG FTVDIGSVRA FLPGSLVDVR PIRDTTHLEG KELEFKVIKL DQKRNNVVVS RRAVMEAENS AEREELLNKL EEGIEIEGIV KNLTDYGAFV DLGGIDGLLH ITDMAWRRIK HPSEVVEVGQ DLKVKVLKFD RERNRVSLGL KQLGTDPWDN VGGTYPVGSV VKARVTNLTD YGCFAEISEG IEGLVHVSEM DHTNKNIHPS KVVQVGDEVE VMILDIDEER RRISLGIKQT LANPWDEFDK KHERGDKITG TIKSITDFGI FIGLDGGIDG LVHLSDISWN ETGEDAIRNY NKGDTVEAMV LSVDSEANRI SLGVKQLTSD PFNEYLVNND RGAIVNGKVK EVDAKGATIE LADEVEAYLR ASEIQRDRVE DATKHLTVGD DVEAKIISVD RKTRNISLSI KAKDEAEERQ AIKELSSTTT TSTAAGSDAQ PKTIGDLIKE QMQ
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