| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1646 |
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| Symbol | |
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| ID | 4035588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2027215 |
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| End bp | 2029698 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637974111 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_580907 |
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| Protein GI | 93006470 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.201466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00102238 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAAAAAT CTAATTCTAA GCAACCACAG TCCTCTAAGC CTGCTATCAA TACGCTACCT
TCCCAGCAGC GCGGTGTGGT GTTTAGTAGT ATTTTATTAA TTGTTGTCAT CGCTGGCATG
GTGCTATTAG CACTATACTT GGTCAAACTT GATCGCACCA TTACTCACAA GTTTGAGGGT
AAACGCTGGG ATATTCCTGC CAAAGTATAT TCGCAGCCAT TAGAGCTGTA TCAAGGGGCC
AACGTCGATA AAGACACGAT GAAGAAATGG CTTGAGCTAC TTAATTATCA AAGTGATAAA
GCCTATGATC GCACGGGTAC TTATCATAAA TCGGGTAATA CCTATTTTAT TCATACACGT
GGGTTTACTT ATAGCGCTAA TGATATAGAT CAAGAGCAAG TCATCAAAAT GACTATTGCT
GGTGATAAGA TTGAGTCAGT ACAAAGTACT GTGGCGGCGA AAACCGGCAT TATCCGTCTT
GAACCGGTGA ATATCGGTGG TATTTACCCA GATAGTAACG AAGACCGTAT GGTTGTCTCG
TTAGATCAAG TACCCCAGCC GCTTATTGAT GCGCTGATAG CGACAGAAGA TCGTGGTTTT
TATGAACATA AAGGGGTATC GATACGTGGT ATCGCTCGTG CAGTTATCAA TAACTTCTCT
GGTGGATCAC GTCAAGGTGG CTCGACCATC ACCCAGCAGC TGATCAAAAA CTTTTATCTG
AATTCAGACC GCACAATGAA GCGTAAAGCC AATGAAGCCT TGATGGCTGT GCTACTTGAG
CTGCATTATA GTAAAGATGA GATTTTGCAA GCATATCTCA ACGAGATTTA TCTTGGTCAA
AATGGCAAAC GCTCTATTAA TGGTTTTGGG TTGGCATCAC AATTTTATTT TGATAAGCCT
CTCAATGAGC TGCGCCTAGA TCAGCAAGCA TTGCTTGTCG GTATGGCAAA AGGACCGAGC
GTTTATAATC CGCGCCGTCA TCCAAACGAT TCAAAGGCGC GTCGCGATGT TGTGCTTAGC
AATATGTTGG CCGTCGGCTC GCTCAGTCAA GAAGACTACG ATAAAGCATT AAAAAACTCA
CTTGGGGTAG TTGATAAGCC TGTTGAAGGT AAAAGCCAAT TCCCTGACTT TTTAGATATC
GTCAAGCGTG AACTAAATAA AGTCTATTAT TCCGATGATC TCAAAAATGA AGGTCTGATT
ATCATCAGTA CGATGGACCC TATTGCCCAG TTGGCAGCGG ACAAAGCGGT TGAGAGAAAG
CTTGGCGAGC TACGCCGTAG TGGTAGCAAA ACCAAAGATT TACAAGGGGC ACTGGTCAGT
GCCAATCCTG AGACGGGTGA GCTGGTTTCT GTTGTCGGTA GCGGCAGCGA GTTTACTGGC
TTTAACCGTG CGGTCGATGC CAAACGCCAA GTAGGCTCAT TATTAAAGCC GATTATTTAT
ATGACTGCTC TCGAAAGTGG TCGCTATAAT TTGGCAAGTT CGGTTGATGA CTCCCCTATT
ACGGTCAGTC TAAGCGACGG TACCGAATGG AATCCCAAAA ACTATGACAA TCGTGATCAT
GGCTACATAC CCTTTACCAC AGCGCTGTCG CAATCGTATA ACCATAGTGC CGTACGCTTA
GGGATGGAGT TTGGAGTCGA CACCTTTGCC AAGCAATTAA AACGTATGGG CGTTAAAGAG
AAAATACCTC CTTATCCTGC GGCATTATTG GGCTCAGTCA ATCTAAGCCC GATGGACATG
CTTGGGGTCT ATCAAGTTTT TGCAACGGGT GGTTTCCGTA CGCCTATTCA TAGTATCCGT
AGTGTGATTG ATGATCGCGG TAGTATTTTG CAGCGCACAG GCTTAAATAC TCAGCGCAGT
ATTCCGCCTG AGACCAACTT TTTGATTAAT TATGCGTTGC AAGATGTCGT CAAGAACGGT
ACAGCTAGAC GCGTGCAATC GCTTGGTAGC AATCTAAATC TTGCGGGCAA AACAGGTACT
ACCAATGATT ACCGCGATGC GTGGTTTGCC GGTTATAGTG GCAACTATGT CAGCGTGGTT
TGGGTTGGAC GTGATGATAA TAAACCGATT GGGCTTAGTG GCGGTAGCGG TGCTTTGCCA
GTTTGGGTTG ATTATATGAA TCGTCTAAAA CTGACACCTG TTGCGCTACC AGAGCCAGAA
GGCATCGAAT GGCTCTGGTT AGAGAACAAC TCAGGCAAGC TGTCTAATGA GCGCTGTGCC
AGCGCACGCT ACTTGCCTGT TATGTCAGCA TATTTGCCCC AAGAAGCCAG CAGCTGTGCG
ATTGGCTTAT ACCAACAGGA TCGTGCGCGC GAGCAAATGC AGTGGCAAAA TCAGCAAGGC
GATATCAATA AGCAACGTCG CCGTGAAGGA TTAGACATAC CAGATGGTGA AGTTATTGAT
AATAATAGCA ATGATGCCGA GCAAGACGGT GATACACCCA ATCGTGTAGA TACTTGGTAT
GATCGTGCTG TTGAATGGTT TTAG
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| Protein sequence | MQKSNSKQPQ SSKPAINTLP SQQRGVVFSS ILLIVVIAGM VLLALYLVKL DRTITHKFEG
KRWDIPAKVY SQPLELYQGA NVDKDTMKKW LELLNYQSDK AYDRTGTYHK SGNTYFIHTR
GFTYSANDID QEQVIKMTIA GDKIESVQST VAAKTGIIRL EPVNIGGIYP DSNEDRMVVS
LDQVPQPLID ALIATEDRGF YEHKGVSIRG IARAVINNFS GGSRQGGSTI TQQLIKNFYL
NSDRTMKRKA NEALMAVLLE LHYSKDEILQ AYLNEIYLGQ NGKRSINGFG LASQFYFDKP
LNELRLDQQA LLVGMAKGPS VYNPRRHPND SKARRDVVLS NMLAVGSLSQ EDYDKALKNS
LGVVDKPVEG KSQFPDFLDI VKRELNKVYY SDDLKNEGLI IISTMDPIAQ LAADKAVERK
LGELRRSGSK TKDLQGALVS ANPETGELVS VVGSGSEFTG FNRAVDAKRQ VGSLLKPIIY
MTALESGRYN LASSVDDSPI TVSLSDGTEW NPKNYDNRDH GYIPFTTALS QSYNHSAVRL
GMEFGVDTFA KQLKRMGVKE KIPPYPAALL GSVNLSPMDM LGVYQVFATG GFRTPIHSIR
SVIDDRGSIL QRTGLNTQRS IPPETNFLIN YALQDVVKNG TARRVQSLGS NLNLAGKTGT
TNDYRDAWFA GYSGNYVSVV WVGRDDNKPI GLSGGSGALP VWVDYMNRLK LTPVALPEPE
GIEWLWLENN SGKLSNERCA SARYLPVMSA YLPQEASSCA IGLYQQDRAR EQMQWQNQQG
DINKQRRREG LDIPDGEVID NNSNDAEQDG DTPNRVDTWY DRAVEWF
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