Gene Pcryo_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1640 
Symbol 
ID4035582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2020625 
End bp2020870 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content48% 
IMG OID637974105 
Productcarbon storage regulator 
Protein accessionYP_580901 
Protein GI93006464 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000047794 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000536973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAATTT TGACACGCCG CGTGGGCGAA ACGCTAATGA TTGGCGACGA GGTCAGTGTG 
ACTGTCCTAG GTGTCAAAGG CAATCAAGTA CGTATCGGCG TTGATGCGCC AAAAGATATT
GCCGTACACC GCGAAGAGAT TTATCAGCGC ATTCAACATG AGCGCACGGT ACAGTCGCAA
ATGCAGCATC TTGAGCAAGG CAGCTTTGCG CCTTCATTTG ATGATGAAGA CTATTTTAAT
CGCTAA
 
Protein sequence
MLILTRRVGE TLMIGDEVSV TVLGVKGNQV RIGVDAPKDI AVHREEIYQR IQHERTVQSQ 
MQHLEQGSFA PSFDDEDYFN R