| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1638 |
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| Symbol | alaS |
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| ID | 4035580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2015928 |
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| End bp | 2018600 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637974103 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_580899 |
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| Protein GI | 93006462 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00107041 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCCAGC CATTTCGCTC AGCCGATATT CGTCAAGCTT TTATCGATTT TTTCATAAGC
AAGCAGCATA CCCCCGTCGC CTCATCGAGT TTGATTCCGC ATAATGACCC GACATTGCTA
TTTACCAATG CCGGTATGAA TCAGTTTAAA GAGACATTTT TGGGTATGGA GCCACGTGAT
TATACGCGTG CAGTAACCTC GCAAAAGTGC GTAAGAGCGG GCGGCAAGCA TAATGATTTG
GATAACGTCG GCTATACGGC GCGCCATCAT ACGTTTTTTG AAATGCTTGG TAATTTCTCT
TTTGGCGATT ATTTTAAGCA AGCCGGTATT GGTTATATTT GGGAATTTTT GACCTCAGAT
GAATGGCTAG CAATCGATAA AAATCGCTTG TATGTGACCA TTTATGAGAC TGACGACGAA
GCCTTTGATA TTTGGCATAA AGACATCGGT ATTCCTAGCG AGCGCATTAT CCGTATTGGC
GATAATAAAG GTGCGCCTTA CGCCTCAGAC AACTTTTGGA CGATGGGCGA TACCGGTCCT
TGTGGTCCTT GTACCGAAGT CTTTTATGAC CATGGTGCTG ATATCGAAGG CGGTCTACCG
GGCACACCTG AAGAAGATGG CGACCGTTAT ATCGAGATTT GGAACTGTGT CTTTATGCAG
TTTAATCGTC AAAAAGACGG CTCTATGTTG CCGCTACCAG CGCCAAGCGT AGATACTGGC
ATGGGACTTG AGCGTATCAG CGCCATCATG CAAGGCGTCC ATGGCAACTA CGAGATAGAT
TTGTTTGTAC ATTTGATGGA TGCGGCGGCT GAGATTTTAG AGATTGAAAA CCAGCAACAA
TCGTCATTAA AAGTCATCGC TGACCATATT CGCGCTGTTT CATTTTTGAT TGCTGATGGC
GTCACCCCAA GCAACGAAGG TCGTGGTTAC GTACTGCGCC GTATCATTCG TCGTGCAGTA
CGTCATGGCA ATAAGCTTGG TGCTGACAGT GAGTTTTTCT ATAAAATGGT CGCGCCTTTG
GTTGCTGAAA TGGGTACGGC GTATCCTGAG CTCAAAGATA AGCAAAGCGT CATTGAAAAT
GCCATTCAAA AAGAAGAAAC CCAATTTGCC AAAACCTTAG CACAAGGTTT ACGTCTGCTT
GCCAGCGAAT TGGAAGGTCT AAAAGATGGT GATACCCTTT CTGGCGAAGC GGCATTTAAG
CTATATGATA CCTATGGCTT CCCTGTTGAC TTGACCGCTG ATATCACCCG TGAGCGCGGT
ATTGTGATTG ATGAAGCCGA GTTTGATGAA CATATGCAAG CACAGCGTGA ACGTGCGCGT
GATGCAGGCA AGTTCGACGT TGATTACAGT AGTGTCATTC AAGTAGAAAA TCCAACGACC
TTTATCGGTT ATGAGCAGCT TGAAGAAGAA GGTGTCACGA TTGATGCGCT GTATCAAGAT
GGCAATCCAG CCGATAGCCT AACTGAAGGT ATGGAAGGCG TTATTGTCCT TGACCGTACA
CCGTTTTATG CGGAAGGCGG TGGTCAGGTT GGTGAGCTTG GTGAGATTCG TACCGCATCA
GGGGTCTTTG AAGTCCAAGA TACTAAAAAA TCTGGTCAAG CCATCATTCA CTATGGTGTC
GTGACCATGG GTGACATTAG TACTAAGCAA ACCGCTGATG CGCAAGTATT GTCGAGTATT
CGCGCAGCCA GTGCCAAAAA CCACTCTGCC ACGCATCTCT TACATGCTGC ATTAAGAGAA
GTATTGGGCG ACGCGGTCAC GCAAAAAGGC TCGCTAGTAT CAAGCGAAGT ATTGCGTTTT
GATTTCTCCT ATGACAAGCC CGTCAGCACT GCTGAAATTA CGCGTATCGA ACGCTTAGTC
AATGAGCAAA TTCAAGCCAA CACCCCTGCT CGCATCGAGA ATATGTCTAT TGACGAAGCG
ATGAAACAAG GTGCAATGGC ATTGTTTGGC GAAAAATATG GTAGTGATGT TCGCGTCTTA
ACCATGGGTA CTGGCAGTAT CATCGATGGT CAACGTAAGC CCTTCTCTAT TGAACTTTGT
GGTGGTTTGC ACGTTAAACG TACCGGTGAT ATTGGTGTGT TAAAAATCAC CAGCGAATCA
GGTATCGCTG CTGGCATCCG CCGTATTGAA GCTGTTACTG GCATGAATGC GATTAAAAAT
ATCCAGCAAA GTGAGCAGCA GCTGAGCGAG CTTGCCAGTC AGCTAAAAGT TAAACGTCCA
GAGGTTGCAC AGCGCGTGCG TACCATGGCG GATAAGCAGC GCGAACTTGA GAAACAACTA
GAGCGTTTAG AGCAAAAAAT CGCCAGCGCC CAAGCCGCAA ACTTGCTTGA TGACGTGCAA
ACCATCGCTG GTACGCCAGT ACTTATCAGT ACCTTAAGTG GTATCGATGG TAAATCTATC
CGTACGTTGA TGGACGATAT CAAATCAAAA CTACCAGATA GTGTGATTGT ATTGATTGGT
GATAAAGATG AGCAGTTAGC ACTAGCCGCC AGTGTGGCAA AGTCTGTGAC TGCGAAAGTA
AAAGCCGGTG ACATCATTCG TCATTTGGCA AGTGAGCTTG GTGGTAAAGG TGGTGGTAAA
CCTGACTATG CTCAAGGCGG CGCGCCAAAA GCTGCCAATA CTAATGCTGT TGTCAATGCG
CTACCTGCTT GGATTGCGGA CCAGCTTGGC TAA
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| Protein sequence | MSQPFRSADI RQAFIDFFIS KQHTPVASSS LIPHNDPTLL FTNAGMNQFK ETFLGMEPRD
YTRAVTSQKC VRAGGKHNDL DNVGYTARHH TFFEMLGNFS FGDYFKQAGI GYIWEFLTSD
EWLAIDKNRL YVTIYETDDE AFDIWHKDIG IPSERIIRIG DNKGAPYASD NFWTMGDTGP
CGPCTEVFYD HGADIEGGLP GTPEEDGDRY IEIWNCVFMQ FNRQKDGSML PLPAPSVDTG
MGLERISAIM QGVHGNYEID LFVHLMDAAA EILEIENQQQ SSLKVIADHI RAVSFLIADG
VTPSNEGRGY VLRRIIRRAV RHGNKLGADS EFFYKMVAPL VAEMGTAYPE LKDKQSVIEN
AIQKEETQFA KTLAQGLRLL ASELEGLKDG DTLSGEAAFK LYDTYGFPVD LTADITRERG
IVIDEAEFDE HMQAQRERAR DAGKFDVDYS SVIQVENPTT FIGYEQLEEE GVTIDALYQD
GNPADSLTEG MEGVIVLDRT PFYAEGGGQV GELGEIRTAS GVFEVQDTKK SGQAIIHYGV
VTMGDISTKQ TADAQVLSSI RAASAKNHSA THLLHAALRE VLGDAVTQKG SLVSSEVLRF
DFSYDKPVST AEITRIERLV NEQIQANTPA RIENMSIDEA MKQGAMALFG EKYGSDVRVL
TMGTGSIIDG QRKPFSIELC GGLHVKRTGD IGVLKITSES GIAAGIRRIE AVTGMNAIKN
IQQSEQQLSE LASQLKVKRP EVAQRVRTMA DKQRELEKQL ERLEQKIASA QAANLLDDVQ
TIAGTPVLIS TLSGIDGKSI RTLMDDIKSK LPDSVIVLIG DKDEQLALAA SVAKSVTAKV
KAGDIIRHLA SELGGKGGGK PDYAQGGAPK AANTNAVVNA LPAWIADQLG
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