Gene Pcryo_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1635 
Symbol 
ID4035577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2010980 
End bp2012083 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID637974100 
Productchorismate synthase 
Protein accessionYP_580896 
Protein GI93006459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0500037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00265035 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGGCA ACAGTATTGG GCAGGTCTTT ACCGTCACCA CCTGCGGTGA GTCGCATGGT 
GCAGGTTTGT TGGCAATCGT CGATGGCGTG CCACCAGGTT TAGCCTTATC CGAAGCCGAC
TTGCAAATAG ATTTGGATCG CCGTAAACCG GGTACTTCTA AGTACTCGAC CCAGCGCCGT
GAATCTGATG AAGTCGAGAT TATCTCTGGC GTTTTTGAAG GTAAAACGAC AGGTACTTCT
ATCGGTCTAC TGATTCGTAA TACCAATCAA AAATCTAAAG ACTATGGTGA AATTAAAGAT
ACCTTTCGCC CTGGTCATGC CGATTATACT TATAGTATGA AGTATGGCTT TCGTGACTAT
CGTGGCGGTG GTCGATCATC GGCGCGTGAG ACTGCCATGC GTGTAGCGGC AGGTGCTATC
GCCAAAAAAT ACTTGCTAGA GCGCTTAGGT GTGCAAATCC GTGGTCATGT GACCCAAATT
GGTCATGAGT ACAGTGATGT CCTAAACTCG AGCACAATCG ATTGGGATTT TGTGAATAGT
AATCCGTTTT TCTGTGCGGA TGCCGATGCT GTCAGTCGCT TTGAGACCTT GATAGATAGT
TTACGCCGTG AAGGTACGAG CTGTGGTGCC CGTCTTGAGA TTATTGCAAG CGGTGTACCA
GTTGGACTTG GTGAGCCTGT CTTTGACCGT TTAGATGCCG ATATTGCCCA TGCCATGATG
AGTATCAATG CTGTTAAAGG TGTTGAGATT GGTGATGGCA TGGCAGTGGC AGGACAATTT
GGGCATAGCT CTCGTGATGA AATGACACCC GATGGTTTTA CCGCCAATCA TGCAGGCGGC
ATCTTGGGTG GTATCTCATC AGGACAAGAT ATCCGTGTCA GTATTGCACT GAAGCCAACC
TCTAGTATTA CTACGGCTGG CAAGAGTATC AATACAGAGG GGGAGGCGAT TGAGATGCTG
ACTAAAGGTC GTCATGATCC TTGCGTTGGT GTACGTGCAA CACCTATCGC CGAAGCTATG
TTAGCGATTG TGTTACTGGA TCATTATCTG CGTCATCGTG GTCAAAATGC CGATATTAAG
CAACCAGTCC AATCGATTAC TTAA
 
Protein sequence
MAGNSIGQVF TVTTCGESHG AGLLAIVDGV PPGLALSEAD LQIDLDRRKP GTSKYSTQRR 
ESDEVEIISG VFEGKTTGTS IGLLIRNTNQ KSKDYGEIKD TFRPGHADYT YSMKYGFRDY
RGGGRSSARE TAMRVAAGAI AKKYLLERLG VQIRGHVTQI GHEYSDVLNS STIDWDFVNS
NPFFCADADA VSRFETLIDS LRREGTSCGA RLEIIASGVP VGLGEPVFDR LDADIAHAMM
SINAVKGVEI GDGMAVAGQF GHSSRDEMTP DGFTANHAGG ILGGISSGQD IRVSIALKPT
SSITTAGKSI NTEGEAIEML TKGRHDPCVG VRATPIAEAM LAIVLLDHYL RHRGQNADIK
QPVQSIT