Gene Pcryo_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1616 
Symbol 
ID4035766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1988824 
End bp1990026 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content38% 
IMG OID637974081 
Productabortive infection protein, internal deletion 
Protein accessionYP_580877 
Protein GI93006440 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTT ATATTCGCTT TAATAATTTT TACTCTTACT CAGAGTCTAC TGAGGTGTCA 
TTCTCTTTGG GTAAGCAACC TACTAAGACT GACTATGATT TTTATGTTGA TACCACGCAA
GACCAGTATC GACTAAATAA AGTCACAGCT GTTCTTGGCG CGAATGGCTC CGGTAAAACG
CAGCTATTAA AAGCCATTGC TTTTCTTCGT TGGTTTATGT GTGAATCTAC TAGCAGCCTT
GACTCAGAGC AACCTATTTC TTTTAGCCAA TTTGCGCTAA GTAATGATGA ATTTTCTGAA
TTTGAATTTG GTTTTTTACT TAAAAATGCT GATGGCATTT ATGATGAGTA TCGCTATGAG
CTAACGTTGA CACAGCATAG CGTGGTTAAA GAGGCATTAT ACAAAAAGAC CAGTAGCCAA
TTTAGCTATG TATTTATACG TCATCATGAC GGTGACAAGC TTAGCTATAA GCATCGTAAC
TTTGTCATTC CCTCTTTAGC TGATGATGTG AAAAAAAACG CCTCACTTAT CAGCTATGCC
AATTTGCTCG ATGAGCCATT GGCAGAAGCC ATTTTTGATA TGTTCAATCA CTATAAAACT
AATGTAGTCT CAATGGGTAG GCTTGGTAGC CTTAGCCAAT CTATACCTGA AATGACAGAA
TTATTTGCTA GAGATGATGG TTTAAAACAA ACCGCTGAAA AGCTACTTTG TCAGTTCGAT
ACGGGCATCG ATGAGATTAA TATAAAAAGC GTGATGATGG TAAACGAGGG TAAACAGCAA
GAAGTACTGC TACCTTTTGG TGTTCATAAA GTGGGTGATG AATCATTTGA GCTTATGATT
TATGAAGAGT CTAATGGTAC ACAATCAGCC TATAGCTTGC TTGGGCTCAT ATTGCCAGTG
CTTAAGAATG GTGGTGTGGC CATTATTGAT GAGCTTGATA ATGACTTACA CCCCCTACTG
TTACCTGCCA TTTTTGATTT GTTTCGCTCA TCGCATCATA ATCCTCATAA TGCTCAGCTT
ATTTTTAGTT GCCATACCCC TGAGGTGTTC AACTTATTAA ACAAGCATCA AATTTATTTG
GTCGAAAAAT ACGAGCAAGC TTCAGAATCT TGGCGGCTTG ATGAGATGGA AGGGATTCGT
AATGATGATA ACCTTTATGC AAAATATATG GCTGGCGCAT TTGACGCGAT ACCAAATCTA
TAA
 
Protein sequence
MITYIRFNNF YSYSESTEVS FSLGKQPTKT DYDFYVDTTQ DQYRLNKVTA VLGANGSGKT 
QLLKAIAFLR WFMCESTSSL DSEQPISFSQ FALSNDEFSE FEFGFLLKNA DGIYDEYRYE
LTLTQHSVVK EALYKKTSSQ FSYVFIRHHD GDKLSYKHRN FVIPSLADDV KKNASLISYA
NLLDEPLAEA IFDMFNHYKT NVVSMGRLGS LSQSIPEMTE LFARDDGLKQ TAEKLLCQFD
TGIDEINIKS VMMVNEGKQQ EVLLPFGVHK VGDESFELMI YEESNGTQSA YSLLGLILPV
LKNGGVAIID ELDNDLHPLL LPAIFDLFRS SHHNPHNAQL IFSCHTPEVF NLLNKHQIYL
VEKYEQASES WRLDEMEGIR NDDNLYAKYM AGAFDAIPNL