Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1608 |
Symbol | |
ID | 4035968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1975909 |
End bp | 1979457 |
Gene Length | 3549 bp |
Protein Length | 1182 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637974073 |
Product | hypothetical protein |
Protein accession | YP_580869 |
Protein GI | 93006432 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.102768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACGA CCAAACTCAA AAAATTTGCT CAACAGGCAC GTGTCACTTT GATTGAGCAA GTCGCTACTA AGCTCAAATT TGTACGCGCA GAAGAAAGTT TAGCCAGACG TGAGAATCCT ATCGCTGTTA AAAAGCTAGA GGAGCTAATC AAGCAGCAGT CCGAACAGGA AATCGTCGAG CGTATCGCAT ACATCTGGTT CAACCGTTTC TGTGCCCTTC GCTTCATGGA TATGAATCGC TATAACCGCA GCCTCGTGGT CTCTGCTGCT GCCGATGATA CTCAACCTGA AGTACTGGCG CTGGCAAAGG CTGGAGACAT TGATGAGCGA GTGGTATCAG AACCAGTCCG TGAGCAAATC CTCAATCTGT TAAATGGCAG AGCGCCCAGT CAAAATCCTG AAGCAGAAGT TTATCGTCTG CTACTGGTCG CATACTGTAA TCAATGGCAT GAGTCCATGC CATTCTTATT CCAGCGTATC GACGACTATA CAGAGTTGCT AATGCCTGAT GACTTGCTGT CCAGTAGCTC AGTATTAACT GATATGCGTG AAGCCATGCC AGCAAGCGCT TGTAAAGACG TTGAAGTCAT TGGTTGGTTG TATCAGTTTT ACATATCAGA TAAAAAAGAT GATGTATTTG CAAGATTAAA GAAAAATGAG AAAGTGACAC CAGAAAATAT TCCAGCGGCT ACTCAGCTAT TCACGCCACA TTGGATCGTA CGTTATTTGG TAGAGAACTC GCTTGGGCGA TTATGGTTGC TTAATCATCC AGAGTCCAAG TTAGCAGACA GCATGGAATA CTATATAAAG CCTGCTGATG ATAATGATGA CTCTGATTAT CTCAAGGTAG CGCGTCCAGA AGATCTTAAA ATTTGCGATC CAGCATGTGG CTCAGGTCAC ATGCTGACTT ATGCGTTTGA TCTGCTATAC GCGATCTATG AAGAGCAAGG CTATGGTGCA GCAGACATAC CTTCGCTTAT CTTAACGCAT AACTTGTACG GTATTGAGAT TGATGAACGA GCTGGTGAGT TGGCTGCTTT TGCATTGACT ATGAAGGCAA GAGATCGTCA TCGTCGATTC TTCAATACAG ATGTGCGTCC AAATATCTGT GTGCTTGAGC CCATTAGTTT TGATGACGAT GAGTTAGATG AGTATATGGA CTTTATCGGC CGTGATATAT TTACCGCTGA CTTAGAGGAA ACGCTGCGCC AGTTTGATGA GGTCGATAAT TTTGGTTCTT TGATCAGACC AAAGCTAAAA AATGTTGCTG AAATTTTAGA GCAGTTGGAA GCGACTGATG TCTCAGGGCA GTTATTTTTA GGTCATACGC ATCAAAAAGT GCTTAAGCTG TTAAAGCAGG CAGATTATTT AAGTCCGCAG TATCATGTCG TTGTTGCTAA CCCGCCTTAT ATGGGTGGCA GTGGCATGAA TAATCGATTA AAGGCATGGG CAAAGAAAGA GTTTCCAAAT AGCAAGTCTG ATTTATTTGC TATGTTCATT GAGCGAAGTC TTGATTTAGT TTGTAATCAA GGGTTAGTAG CTATGATAAC TATGCATAGT TGGATGTTCT TATCTTCATT TAAAGAGTTG AGAGAACAGC TTCTTAATCA AGTTACGATA ACTTCTATGG CTCATTTAGG CTCGAGAGCA TTTGATAGTA TTGGCGGAGA GGTAGTTCAA ACAACAGCTT TTATTATGAA AAAATTGAGT GACCTTGACT ATAAGGGAAA TTACTTACGT TTAGTTGATG GTAATTCTGA ATTTCAAAAA AACAGGATGA TACTTGAAAT TAGCGAGGAA AAGAAATTTA ATAACCTATA TCAATCTTCA GCCAACGATT TTAAGAAGAT ACCAGGAAGA CCTATAACTT ACTGGATCAG TAAGCCATAT ATAGACTGCT ATGATAATGG TGAATTAATT AAGGATGTTT TTCCTGCAAA ACTAGGCATG CGTACTGGCG ATAATGCCAA ATGGTTACGA CTGTGGTATG AAACATCTTT AATCAAATGT AGCTTTTCTG ATCTTAATTC TGACCAAGAT ATTCAACTAC CAAAAAGCTG GTTTCCTTAT AACAAAGGTG GTGAGTTTCG TCGCTGGTAT GGTAACAATG AGTTTTTAGT TTTTTGGGAA AATGATGGTT ATGATATTAA AGAAGAAACA CTTATCAAGT ATCCGCAGCT TAGCTGGGAT AATCTAGGAT GGAAAATCAC TAATGAGTCA GATTTTTTTA AAAAATCATT AACATGGTCA TTCATTAGCT CCAATAGTTT TGGTGTTCGA TGTTCGTTAG GTGGGGCTAT ATTCGATGTA GGTGGATCAA GCATTTTTCC AGAAGGTGAT AACTATTATT TAGCAGCAGG TTATTTATGT TCTAAAATTT GTTTTGAATT TCTTAAAGCA ACTAATCCTA CTCTTAATTT TCAGGTAGTT AATATAAATA ACTTACCTTG GATTCAGTTG GATGAAGAGA ATTGTAAAAG AGTAAATGAG TTAGTGAAAA AATTAGTTGA ATATAGCAAG TTTGATTGGG ATTCTTACGA AACCTCATGG GACTTTACTA CATTAACACT GCTCGAAGAA AAATATCGCA AGTCAAATTT AGCAGACACT TATAAAGGAC TACGCACTCA TTGGCAACAA ATGACCAATG ACATGCAACA CTTAGAAGAA GAGAATAACC GCATTTTTAT CGACGCTTAT GGCTTACAAG ATGAGCTTAC GCCAGATGTT CCGCTAAAAG AAATGACTTT GACCAGTAAC CCATACTATC GTTATGGTGG CGTCAAGACA GACGATGAGC TGGAGGCGTT ATTGCTAGCC GATACCATGC GTGAGCTGAT CTCTTATGCA GTCGGCTGTA TGTTTGGTCG CTATAGCTTA GACAAGCCTG GGCTGATACT TGCCAATCAA GGTGACAAAA TAGAGCAGTA CTTTGAACAG ATACCTGATC CAAGCTTCAT GCCTGATAAA AACAACGTTA TTCCTATCTT AGACGATGGT TGGTTCAGCG ACGATATTGT TGAGCGCTTC CGTAAATTCA TTAAGGTAGC TTTTGGCGAA GAGCAGTATG AGAGCAATAT GCAATTCATT GAACAGTCGC TTGGCAAGAA TGACAAGCCA CGTGATATTC GTGACTATTT CTTAAAAGAC TTCTATGACG ATCACGTAAA ACGTTATAAG AAACGTCCAA TATATTGGCT ATTTACCAGT GGTAACTTCA GTGCGCTTAT CTACATGCAT CGCTATCAGC CCGATACGGT AAGTATCGTG CTCAATGACT ATCTACGTGA GTTCCGTACT AAGCTTAATG CTTATAAAGA CCAGCTTGAT ACGATCAAAA TTAGTAGTAG TCAAAGCCAA AGTGAAAAAA CAAAGGCAAT AAAGAAGCTA GAAACTACTA CCAAAATGAT TACTGAGATG GAAGAGTATG AGCGCGATGT ACTCTATCCA TTAGCGACCA AACAGATCGA CATAGACTTA GATGATGGCG TAAAAGTAAA CTATCCTAAA TTTGGTAAAG CATTAAAGAA AGTAACGGGG CTTAGCTAA
|
Protein sequence | METTKLKKFA QQARVTLIEQ VATKLKFVRA EESLARRENP IAVKKLEELI KQQSEQEIVE RIAYIWFNRF CALRFMDMNR YNRSLVVSAA ADDTQPEVLA LAKAGDIDER VVSEPVREQI LNLLNGRAPS QNPEAEVYRL LLVAYCNQWH ESMPFLFQRI DDYTELLMPD DLLSSSSVLT DMREAMPASA CKDVEVIGWL YQFYISDKKD DVFARLKKNE KVTPENIPAA TQLFTPHWIV RYLVENSLGR LWLLNHPESK LADSMEYYIK PADDNDDSDY LKVARPEDLK ICDPACGSGH MLTYAFDLLY AIYEEQGYGA ADIPSLILTH NLYGIEIDER AGELAAFALT MKARDRHRRF FNTDVRPNIC VLEPISFDDD ELDEYMDFIG RDIFTADLEE TLRQFDEVDN FGSLIRPKLK NVAEILEQLE ATDVSGQLFL GHTHQKVLKL LKQADYLSPQ YHVVVANPPY MGGSGMNNRL KAWAKKEFPN SKSDLFAMFI ERSLDLVCNQ GLVAMITMHS WMFLSSFKEL REQLLNQVTI TSMAHLGSRA FDSIGGEVVQ TTAFIMKKLS DLDYKGNYLR LVDGNSEFQK NRMILEISEE KKFNNLYQSS ANDFKKIPGR PITYWISKPY IDCYDNGELI KDVFPAKLGM RTGDNAKWLR LWYETSLIKC SFSDLNSDQD IQLPKSWFPY NKGGEFRRWY GNNEFLVFWE NDGYDIKEET LIKYPQLSWD NLGWKITNES DFFKKSLTWS FISSNSFGVR CSLGGAIFDV GGSSIFPEGD NYYLAAGYLC SKICFEFLKA TNPTLNFQVV NINNLPWIQL DEENCKRVNE LVKKLVEYSK FDWDSYETSW DFTTLTLLEE KYRKSNLADT YKGLRTHWQQ MTNDMQHLEE ENNRIFIDAY GLQDELTPDV PLKEMTLTSN PYYRYGGVKT DDELEALLLA DTMRELISYA VGCMFGRYSL DKPGLILANQ GDKIEQYFEQ IPDPSFMPDK NNVIPILDDG WFSDDIVERF RKFIKVAFGE EQYESNMQFI EQSLGKNDKP RDIRDYFLKD FYDDHVKRYK KRPIYWLFTS GNFSALIYMH RYQPDTVSIV LNDYLREFRT KLNAYKDQLD TIKISSSQSQ SEKTKAIKKL ETTTKMITEM EEYERDVLYP LATKQIDIDL DDGVKVNYPK FGKALKKVTG LS
|
| |