Gene Pcryo_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1594 
Symbol 
ID4035952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1952267 
End bp1952980 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content46% 
IMG OID637974057 
Product3-oxoacid CoA-transferase, subunit A 
Protein accessionYP_580855 
Protein GI93006418 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT CAAAGGTGTA TAACAGCGCA GAAGCGGCGT TGAGTGGTGT TGTGCGTAAC 
GGACAAACGC TGGCGATCGG TGGTTTTGGT CTATGCGGTA TTCCTGAAGC GTTAATCGAA
GCATTGCGGG ATAGTGGTGT TGAAGATTTG ACGTGCATCA GTAATAACGC TGGTGTCGAT
GACTTTGGCT TGGGATTGTT ATTACAGACG CGCCAAATTA AAAAAATGAT CTCATCTTAT
GTGGGTGAAA ATAAAGAGTT TGAGCGCCAG TACTTGGCAG GCGAGTTGGA AGTTGAGCTG
ACCCCGCAAG GCACCTTAGC AGAAAAACTA CGTTCAGGTG GTGCAGGTAT TCCGGCATTT
TATACCGCAA CCGGCGTTGG TACCTTAGTT GCTGAAGGCA AAGAAACCCG CGAATTTGAC
GGTCGTACTT ATGTGCTTGA GCATTCATTA CGCGCTGATG TGTCTCTAAT CAAAGCGCAG
AAAGCGGATA AAGCAGGTAA CTTAATCTTT AATAAAACGG CGCGTAATTT TAATCCAGAC
TGTGCGATGG CGGGCAAGAT TACTATTGTT GAAGTTGAAG AGATCGTAGA AACAGGCACC
TTAAATCCTG ATGAGATTCA TCTGCCGGGT ATTTTTGTGC AGCGTATCGT ATTGAATAGC
AGCCCTGAAA AGCGTATCGA AAAGACAACA ACTAAAGTGG TCGAAGGCGC TTAG
 
Protein sequence
MSQSKVYNSA EAALSGVVRN GQTLAIGGFG LCGIPEALIE ALRDSGVEDL TCISNNAGVD 
DFGLGLLLQT RQIKKMISSY VGENKEFERQ YLAGELEVEL TPQGTLAEKL RSGGAGIPAF
YTATGVGTLV AEGKETREFD GRTYVLEHSL RADVSLIKAQ KADKAGNLIF NKTARNFNPD
CAMAGKITIV EVEEIVETGT LNPDEIHLPG IFVQRIVLNS SPEKRIEKTT TKVVEGA