Gene Pcryo_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1563 
Symbol 
ID4034415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1916898 
End bp1918013 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content45% 
IMG OID637974026 
ProductDNA-directed DNA polymerase 
Protein accessionYP_580824 
Protein GI93006387 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.233621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAC ATGTTACAAC AACAAACACT AAACCTGCCG TTAGCCAATC TAACCTTCGC 
AAAATCATTC ATATCGATAT GGATGCTTTT TATGCCAGTG TAGAACAGCG TGATTTTCCT
GAGCTGCGTG GCAAGCCATT GGTGGTTGGC GGCGATCCCA ATGGTCGCGG TGTGGTTGCG
GCAGCAAGCT ATGAAGTTCG TAAGTTTGGC GTACGCTCCG CGATGTCATG CTATGAAGCC
AGAAAGCGCT GTCCTGAGGT GATATTTGTA CCGCCGCGCT TTGATGTTTA CCGTGCTGTT
AGTGTTGAGA TACGTCGTAT CATGCACATT CTGACCCCAC ATGTTGAGCC GTTATCATTA
GACGAAGCCT ATTTGGATGT TACTGGATTG TCTGTTCATC AAGGCTCAGC CACATTAATG
GCAAATTGGT TACGAGCGCA GATTTTAGGA CAAACGGGTC TAAACGCCTC TGCCGGTGTC
TCATTTAATA AAATGCTGGC GAAAATTGCC TCTGATATTA ATAAACCTAA TGGCACAGCG
GTCATCACGC CAGCGGATGC TGATGCCTTT ATCAGCGCTT TGCCTATTGA ACGCTTCCAC
GGTATTGGTA AAGCAACGGC CAAACGCCTG CATGCAATGG GTGTTAGTAA CGGCGCTGAC
CTTCGGCGTA CGCCAGCTGC CATACTAGTC AATGAGTTCG GTAAGCGTGG ACAGTTTTAT
CATGATATCG CTCATGGACG TGATGAGCGT GCGGTCAAGT CTGAGCGTAC ACACAAATCA
GTGGGCTCTG AGACTACGTT TAGAGAAAAC TTAACGGATG ATAATGAACT AAAAATACAA
ATCTATGAAC AAAATGCTGA TGCCTTTAGT CAGCTGCACA AAAAACAGCT TATTGCCTAT
ACTATTACTC TAAAGGTCAA ATACTCAGAT TTTACTCAAG TCACGCGCTC GCATACCTTA
TCGACGGCAT TTGATAGCGC AGAATCCGCT CACTTTTGGT TAGATAAGCT ATTTTTGGAC
ATTCCGCGTA CTCTTCCTAT TCGATTGGTT GGTGTGACAT TTTCTTCGCT CACATCTGCA
ACGCAAGTCA CGCCACAATT AAATTTATTT GAATGA
 
Protein sequence
MTIHVTTTNT KPAVSQSNLR KIIHIDMDAF YASVEQRDFP ELRGKPLVVG GDPNGRGVVA 
AASYEVRKFG VRSAMSCYEA RKRCPEVIFV PPRFDVYRAV SVEIRRIMHI LTPHVEPLSL
DEAYLDVTGL SVHQGSATLM ANWLRAQILG QTGLNASAGV SFNKMLAKIA SDINKPNGTA
VITPADADAF ISALPIERFH GIGKATAKRL HAMGVSNGAD LRRTPAAILV NEFGKRGQFY
HDIAHGRDER AVKSERTHKS VGSETTFREN LTDDNELKIQ IYEQNADAFS QLHKKQLIAY
TITLKVKYSD FTQVTRSHTL STAFDSAESA HFWLDKLFLD IPRTLPIRLV GVTFSSLTSA
TQVTPQLNLF E